Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g01340 ATGGATAGTCCTACTGCAATTCAGCCTTCTACACCTGGTTCTGGTTCTGTACCGGGTTTGGAGCCTGGTTGCAATGATGATAGCCAGCGGGTTAAATTCTTATGTAGCTTTCTAGGTAATATAATGCCTCGTCCCCTAGATGGCAAGCTTCGCTATGTTGGTGGAGAGACACGAATTGTGAGTGTTCCTCGAGATATTAGCTATGAGGAGTTGATGAGTAAGATGAGGGAGCTGTATGATGGGGCAGCAATCTTAAAGTACCAGCAACCTGACGAGGATCTTGATGCCCTTGTCTCTGTTGTGAACGATGATGACGTGGTTAATATGATGGAAGAGTATGACAAATTAGGTTCAAGTGATGGATTCACTAGGCTCAGAATCTTTTTGTTCTCACAAGCTGAACAAGATATTTCTTCACATTTCATTGATGGGGATGAGAGGGATACTGAGAGAAGGTATGTTGATGCATTGAATAATTTAAACGATGCTTCAGATTTTATGAAGCAGCAACTAGGTGAGTTTCCTATGCTTGGTTCGGTTGAGGATATGCATGGAGCTGATCAGTTCTTTAATCCAATCAGCGTGGATGCTGGCCTTCATAGCCAGAGAAGTGGTGAGGTGCCCATGACACATTTTAACTTGCATCATCCCACACTACCTCACATTGCATCAGGGCAACACCAGCAACCTGTATCCCAGAGGTATAGTGATGTAGATGCACCATGGAGTCCTGCATATTACTCTCCTAGGCATCATGGTCACCATGACTCTAGATCAGTGGTAGAATTTCCATCTTCTCCTTCTTCTGCAAGGTATCAGATGCCATTTTCAGAGCTGCCAGATAAATGTCTTGATAGAATGCCAGAAGAATATAAGCGGCATCAGGTAAATCACCATTCTGCGTATGATAATCAACCACAATATTCTGATAATGTTGTGTGGTATCCAACTGGACCTACATCTAATGAGAAGTCAGGTTTTCCTGGCAATATTATTCATGGCCCTCATGCTATTGATGGGAATGGTATTTGTGAGTACTGCCGGATGAATTTTCAGAGAAGTCAATCTCCTTTTGAGCACCCAAATATTAGTAATGGACTTCCCGCAGTTGCTAATCCAGATGTGAAGTTGCATCCGGTTATGTACCCTAATGAGCCAAATTTGCCGCATCAAACAAATAATCGGGTTGAGGAAGCAAGGAACCATGTTTCTGGGTCAGGAAGACTGAATGATCATTATGTTCATGATGGTCCTGGCATAAGTTTCTCTCATGGGCACGGTGGTGTGGCTGATGGACATCATTTGCCTTCAAATTACATTCACCAAAGAGTTGGACCTGAATTGAGGCCTGAGCTTTTTCATGATCAAGCAATGGCTACTACAGCCCATCCACAACTTCCACCTTTGGAAGAGCGCAGTGGGCGGTATGGGAACTCACCTCCTTGTGTAGTTGATAGTCATTACCTTGTGGCACATGGACATGTACCTGGGCTTTCTTTTTGGAGAAATACTCCAGCTCCACTTCACATTGGACCATCTTATGAGGCATCCAGTCCACCTCAACAGTTAAATGGTGTGGTCAATGCAGGAATAAGGGGTGAGAGTAGTCCAAGAATTTACAGTGGACCAGACAGTCAAAGTCCTTGGGTTGATTCCTCACACAAAATGCCAGGTCATGATGGATTACCCATCCAAGAATTCCCTTATGCTCATGCTGTGAAGTTCAATCCAAGGACTCTTGGTCAAGAAAATCAACACCCAGTTCCTGTGGACGCTCTTTCCCCACATGACATGAGTGTTGGCATTCGATTGGAACCAGTGCGGGTACCAAAATCACCTTTTAACATGGCTCACAACAATGAGGTTTCAAACAATGGCTCTCATATTTCTGAAGCAATGGGGTCGCTGAGTTTGCATGAGGATAAAGGGGCAGAAAATGCAGACAAGGTTCAGAACTCTAATGCTCAGAGTATATCTTTTTCAGAGCAAAACAAAATCACTGGAAATAACAGCGAAGCCGCTGCTTTTGTTGAGTCTAAAAATGCAAAATCAAAACCTATTGAAGAATGTGGTTATGTTACAACATTAGTAGATGGGGATCTAACTGCTCCTGAAGATTCCAAGCATCTAGCTACTCAATTCAGTTTCGTGCCTGAGTTGATTGCTACTGTAAAAAAGGCTGCATTGGAAGGAGCTGAAGAGGTGAAAGCTAGAGCTAAGGAGCACACCACTTCTCAGAGTCACAATTCAGCAATCAAAGATGACACAGCAAATGATGGAGAGGCAGGGAATGCTCATGGTGATTTAGAATTGGACTTTGATAATGACCACGTGGTTACTTCTAAAATTGAGCCTACAAAAGCTGAGGCAGAAGCTATTGCTAGAGGATTGCAGACAATTAAAAATGATGATTTGGAAGAGATCCGCGAACTAGGTTCAGGAACTTATGGAGCTGTCTATCATGGGAAATGGAAAGGTTCTGATGTGGCAATTAAGAGGATAAAAGCTAGCTGTTTTGCTGGAAGGCCCTCGGAAAGAGAAAGATTGATTGCAGATTTCTGGAAAGAGGCATTAATACTAAGTTCACTTCATCACCCAAATGTTGTGTCTTTCTATGGTATTGTCCGTGATGGCCCTGACAGTTCTTTAGCAACTGTGACAGAGTTCATGATTAATGGATCCCTGAAACAGTTCTTGCATAAGAAAGATAGAACTATAGATCGCCGTAAGAGGCTCATTATAGCTATGGATGCGGCATTTGGGATGGAGTATTTACATGGAAAGAACATTGTGCATTTTGATTTGAAATGTGAGAATCTATTAGTCAATATGAGAGACCCGCAGCGGCCTGTCTGCAAGATTGGTGATTTGGGTTTATCAAAGGTAAAACAACACACTCTAGTATCAGGAGGGGTGCGGGGAACATTGCCATGGATGGCACCTGAACTCCTAAGTGGGAAAAGCAATATGGTGTCTGAGAAGATCGATGTTTATTCATTCGGGATTGTTATGTGGGAACTGCTCACTGGGGATGAACCCTATGCTGATATGCATTGTGCTTCAATAATAGGAGGAATCGTGAACAACACATTACGTCCCCAAATCCCGACGTGGTGTGATCCTGAGTGGAAGTCTCTGATGGAAAGTTGCTGGGCTTCTGATCCAGCAGAGAGGCCATCTTTCTCAGAAATCTCCAAGAAGCTAAGGAGTATGGCCGCGCAAATGAATGTGAAGTAG 3237 0.4337 MDSPTAIQPSTPGSGSVPGLEPGCNDDSQRVKFLCSFLGNIMPRPLDGKLRYVGGETRIVSVPRDISYEELMSKMRELYDGAAILKYQQPDEDLDALVSVVNDDDVVNMMEEYDKLGSSDGFTRLRIFLFSQAEQDISSHFIDGDERDTERRYVDALNNLNDASDFMKQQLGEFPMLGSVEDMHGADQFFNPISVDAGLHSQRSGEVPMTHFNLHHPTLPHIASGQHQQPVSQRYSDVDAPWSPAYYSPRHHGHHDSRSVVEFPSSPSSARYQMPFSELPDKCLDRMPEEYKRHQVNHHSAYDNQPQYSDNVVWYPTGPTSNEKSGFPGNIIHGPHAIDGNGICEYCRMNFQRSQSPFEHPNISNGLPAVANPDVKLHPVMYPNEPNLPHQTNNRVEEARNHVSGSGRLNDHYVHDGPGISFSHGHGGVADGHHLPSNYIHQRVGPELRPELFHDQAMATTAHPQLPPLEERSGRYGNSPPCVVDSHYLVAHGHVPGLSFWRNTPAPLHIGPSYEASSPPQQLNGVVNAGIRGESSPRIYSGPDSQSPWVDSSHKMPGHDGLPIQEFPYAHAVKFNPRTLGQENQHPVPVDALSPHDMSVGIRLEPVRVPKSPFNMAHNNEVSNNGSHISEAMGSLSLHEDKGAENADKVQNSNAQSISFSEQNKITGNNSEAAAFVESKNAKSKPIEECGYVTTLVDGDLTAPEDSKHLATQFSFVPELIATVKKAALEGAEEVKARAKEHTTSQSHNSAIKDDTANDGEAGNAHGDLELDFDNDHVVTSKIEPTKAEAEAIARGLQTIKNDDLEEIRELGSGTYGAVYHGKWKGSDVAIKRIKASCFAGRPSERERLIADFWKEALILSSLHHPNVVSFYGIVRDGPDSSLATVTEFMINGSLKQFLHKKDRTIDRRKRLIIAMDAAFGMEYLHGKNIVHFDLKCENLLVNMRDPQRPVCKIGDLGLSKVKQHTLVSGGVRGTLPWMAPELLSGKSNMVSEKIDVYSFGIVMWELLTGDEPYADMHCASIIGGIVNNTLRPQIPTWCDPEWKSLMESCWASDPAERPSFSEISKKLRSMAAQMNVK 1078
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g01340 1078 MobiDBLite consensus disorder prediction 1 15 - -
Accr9g01340 1078 CDD PB1_UP2 34 130 - -
Accr9g01340 1078 Pfam PB1 domain 46 131 IPR000270 GO:0005515
Accr9g01340 1078 ProSiteProfiles Protein kinase domain profile. 805 1072 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr9g01340 1078 SMART PB1_new 45 130 IPR000270 GO:0005515
Accr9g01340 1078 Gene3D Phosphorylase Kinase; domain 1 791 890 - -
Accr9g01340 1078 ProSitePatterns Protein kinases ATP-binding region signature. 811 832 IPR017441 GO:0005524
Accr9g01340 1078 MobiDBLite consensus disorder prediction 736 771 - -
Accr9g01340 1078 PANTHER SERINE-THREONINE PROTEIN KINASE 88 1071 - -
Accr9g01340 1078 SMART serkin_6 805 1072 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr9g01340 1078 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 893 1078 - -
Accr9g01340 1078 ProSitePatterns Serine/Threonine protein kinases active-site signature. 930 942 IPR008271 GO:0004672|GO:0006468
Accr9g01340 1078 Gene3D - 49 133 - -
Accr9g01340 1078 SUPERFAMILY CAD & PB1 domains 47 138 - -
Accr9g01340 1078 Gene3D Transferase(Phosphotransferase) domain 1 891 1078 - -
Accr9g01340 1078 MobiDBLite consensus disorder prediction 1 22 - -
Accr9g01340 1078 PRINTS Tyrosine kinase catalytic domain signature 924 942 IPR001245 GO:0004672|GO:0006468
Accr9g01340 1078 PRINTS Tyrosine kinase catalytic domain signature 887 900 IPR001245 GO:0004672|GO:0006468
Accr9g01340 1078 PRINTS Tyrosine kinase catalytic domain signature 1039 1061 IPR001245 GO:0004672|GO:0006468
Accr9g01340 1078 PRINTS Tyrosine kinase catalytic domain signature 995 1017 IPR001245 GO:0004672|GO:0006468
Accr9g01340 1078 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 50 132 - -
Accr9g01340 1078 CDD STKc_MAP3K-like 811 1068 - -
Accr9g01340 1078 SUPERFAMILY Protein kinase-like (PK-like) 797 1066 IPR011009 -
Accr9g01340 1078 Pfam Protein tyrosine and serine/threonine kinase 806 1068 IPR001245 GO:0004672|GO:0006468
Accr9g01340 1078 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 798 892 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr9g01340 Accr-Chr9 18622909 18628162 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr9g01340 25 1078 MAP Kinase Kinase Kinase AT5G57610 54.562 0.0 1049
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Accr9g01340 PK_Tyr_Ser-Thr 4.1e-62 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr9g01340 - - gmx:100779077 1496.49