Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g01320 ATGGAATCAAAATTGGACCAAACCATAAGTGGAAAAGTTGTGAGAGCACCAGCATTGGCAGCCAGAATATATGGTGATAAATCTGCATTTTTCGATTGTGGATTCTTGGGATTTCAAGATACTCTTTGGGATGTTCAAGGTCGTCATTACTATAAAAATTGCTATATCCAAGGTGCCATGGACTTCATCTTTGGCAGTGGTCAGTCCTATTTTGAGAATTGTTTGATCAACGTGACGTTAACTACATCGAAGGCTCGAGTTCGTCATGGTTATATAACAGCACAAGGACGAAGTTCAAAGGATGAGACCAGTGGCTTTGTATTTAGAGGTGGCAAAGTTGTGGGAAGTGGTCCAGTTTTTCTGGGGAGAGCTTATGGTCCTTATTCCAGAGTTATATTTCATGGAACATTTCTAGATTCGGTGATCTCTCCTCAAGGATGGGACGACTGGCATCACACAAAAAATGTGGGTCATTTGATGTATGCTGAAGTTGATTGTATTGGCCAAGGGGCAAATCGGAAAAAACGAGTGCCATGGGAGACAAACCTCTCTCCTGCCCAGCTAAATCAGTTTTCGAAATCATCATTCATAGACCAAGATCACTGGCTTGCAAAGATACCTTTGTAA 627 0.4163 MESKLDQTISGKVVRAPALAARIYGDKSAFFDCGFLGFQDTLWDVQGRHYYKNCYIQGAMDFIFGSGQSYFENCLINVTLTTSKARVRHGYITAQGRSSKDETSGFVFRGGKVVGSGPVFLGRAYGPYSRVIFHGTFLDSVISPQGWDDWHHTKNVGHLMYAEVDCIGQGANRKKRVPWETNLSPAQLNQFSKSSFIDQDHWLAKIPL 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g01320 208 Pfam Pectinesterase 16 199 IPR000070 GO:0030599|GO:0042545
Accr9g01320 208 Gene3D - 5 208 IPR012334 -
Accr9g01320 208 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 14 204 - -
Accr9g01320 208 SUPERFAMILY Pectin lyase-like 15 204 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr9g01320 Accr-Chr9 18007874 18009881 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr9g01320 14 203 Carbohydrate Esterase AT1G05310 46.354 3.58e-56 181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr9g01320 - - cave:132169033 259.225