Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g01301 ATGGCATCAAGATCGTTTGCTAATCTCTTAGACTTGGTTAGTGGAGGTTTATTGGATGTTCCTCACACCCCAAGACCTCTTCCAAGAGTTATGACAGTTCCTGGAATCATTTCTGACCTAGATGGTCATGGTAATAATGATGCGGATTCAGATGTTAGCTCGTCTGGGTGTCGGGAGCGGAAAATAATAGTGGCAAACATGCTGCCATTGCAGGCTAAAAGAGATGCAGAATCTGCTAAATGGTGTTTCAGTTTGGATGAGGATTTAATTTTATTACAATTGAAAGATGGTTTTTCTCCAGATACTGAGGTTATCTATGTGGGTTCTCTGAAAGTTGAAATAGATGCCAGTGAGCAGGAAGAAGTTGCTCAGAAACTACTGGAGGATTTCAATTGTGTACCTACCTTTTTACCACATGAACTCCAGAAGAAGTTTTATCTTGGCTTTTGTAAGCAGCAGCTTTGGCCCCTTTTTCATTACATGCTGCCTATGTGCCCAGATCATGGTGACCGCTTTGACCGTGTGCTTTGGCAAGCTTATGTTTCTGCAAACAAAATATTTGCAGACAAGGTCATGGAAATAATCAATCCTGATGATGATTTTGTTTGGGTTCATGACTATCACTTGATGATTTTGCCAACATTTCTTAGGAAGCGATTTCATCGAGTTAAACTTGGATTCTTCCTTCACAGTCCTTTCCCTTCATCTGAGATTTACAGAACTCTGCCAGTACGAGATGAAATTCTGAGGGGACTGTTGAACTCAGACTTAATTGGTTTTCATACATTTGATTATGCTCGCCACTTCCTCTCTTGCTGCAGCAGAATGCTGGGTCTGGACTATGAATCTAAGCGGGGACATATAGGTCTTGATTACTTTGGCCGCACTGTGTATATTAAAATTTTGCCTGTTGGCATTCATATGGGCAGGCTTGAATCTGTATTAAATCTTCCTTCTACATCTGCTAAAATAAAAGAGATTCAGGAAGAGTTTAAGGGCAGGAAGATGATTCTTGGTGTTGATGATATGGATATCTTCAAGGGCCTCAATTTGAAACTTCTAGCCTTGGAGCAGCTGCTGCAGCAGAACCCAGACTTGCTGGGAAAGGTCGTCCTAGTTCAAATTATAAATCCTGCAAGGGGTTCAGGGAAGGATGTTCAAGAAGCAAAGAAGGAAACAAATTTGATTGCCCGAAGGATCAATGATACATATGGCTCAAAACATTATCAGCCAGTTGTTCTCATCGACCGTCCTGTTCCTCGTTTTGAAAAGAGTGCCTATTATGCTGTAGCAGAGTGTTGTATTGTCAATGCTGTGAGGGATGGTATGAATTTAGTCCCGTACAAATATGTTGTCTGCAGGCAAGGAACTGCTCAACTGGACAAAGCATTGGGCAGAAAAAGTGATTCCCCTCGTACCGGCATGCTTGTGGTCTCTGAGTTCATTGGCTGTTCCCCTTCTCTAAGTGGAGCAATTAGGGTCAATCCCTGGGATATTGATGCAGTTGCTGATGCAATGTATTTGGCCATTACGGCATCTGATTCAGAGAAGCAATTGAGGCACGGGAAACACTATCGATATGTCAGTTCCCATGATGTGGCTTATTGGGCCCGCAGCTTCATGCAGGACCTAGAGAGGGCATGCGTAGATCATTACACCAAAGGGTGCTGGGGAATTGGTTTGGGCCTACGGTTCAGAGTTGTTTCTCTTTCTCATGGTTTTAGGAGGTTGTCCATTGACCATGTTGTTTCAGCTTATAAAAGAACTCATAAAAGGGTCATATTTCTTGATTATGATGGTACAATCGTACCGCACTCTTCTATAAATAAAACCCCCAGCTCTGAAGTCATATCTGTGCTGAATACCCTGTGTAATGATGCCAAGAACATTGTGTTCATTGTTAGTGAGAGAGGAAGAGATTCTCTTAGTCAGTGGTTTGCTTCATGCAAGAGGCTGGGACTTGCAGCTGAACATGGTTACTTTTTAAGGTGGAATGGAGACTCAGAATGGGAAACCAGCCACTTGTCTGCTGACCTTGAATGGAAAAATATAGTGGAGCCTGTCATGACTTCATATACAGCGGCAACTGATGGGTCTAACATTGAAACTAAAGAAAGTGGTTTGGTGTGGCATCATCAAGATGCAGACCCTGATTTTGGATCCTGCCAAGCTAAAGAGTTGTTGGATCACCTGGAAAGCGTGCTTGCTAATGAACCAGCTGTCGTTGCGAGGGGACATCATATTGTGGAAGTCAAACCACAGGGAATAAGCAAGGGTTTAGTAGCAGAGCAGGTTCTCTCGACGCTGGTAGATGGTGGGAACCTGCCAGATTTCGTGATGTGCATTGGAGATGACAGGTCGGACGAAGACATGTTTGAGAGCATATCGAGGGTGTCTTGTCCTCCATTGCCAGTTGCTCCAGAGGTGTTTGCTTGCACTGTTGGTGGCAAGCCTAGCAAGGCAAAGTATTATCTTGATGATACTACTGATGTTATAAGATTGCTTAAAGGCCTTGCAGCTGCATCAAATCCAATGCCTAGGAATCCACCCCATTTCAAGGTTTCTTTTGAAAGCACAGCTTGA 2583 0.4332 MASRSFANLLDLVSGGLLDVPHTPRPLPRVMTVPGIISDLDGHGNNDADSDVSSSGCRERKIIVANMLPLQAKRDAESAKWCFSLDEDLILLQLKDGFSPDTEVIYVGSLKVEIDASEQEEVAQKLLEDFNCVPTFLPHELQKKFYLGFCKQQLWPLFHYMLPMCPDHGDRFDRVLWQAYVSANKIFADKVMEIINPDDDFVWVHDYHLMILPTFLRKRFHRVKLGFFLHSPFPSSEIYRTLPVRDEILRGLLNSDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGIHMGRLESVLNLPSTSAKIKEIQEEFKGRKMILGVDDMDIFKGLNLKLLALEQLLQQNPDLLGKVVLVQIINPARGSGKDVQEAKKETNLIARRINDTYGSKHYQPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYVVCRQGTAQLDKALGRKSDSPRTGMLVVSEFIGCSPSLSGAIRVNPWDIDAVADAMYLAITASDSEKQLRHGKHYRYVSSHDVAYWARSFMQDLERACVDHYTKGCWGIGLGLRFRVVSLSHGFRRLSIDHVVSAYKRTHKRVIFLDYDGTIVPHSSINKTPSSEVISVLNTLCNDAKNIVFIVSERGRDSLSQWFASCKRLGLAAEHGYFLRWNGDSEWETSHLSADLEWKNIVEPVMTSYTAATDGSNIETKESGLVWHHQDADPDFGSCQAKELLDHLESVLANEPAVVARGHHIVEVKPQGISKGLVAEQVLSTLVDGGNLPDFVMCIGDDRSDEDMFESISRVSCPPLPVAPEVFACTVGGKPSKAKYYLDDTTDVIRLLKGLAAASNPMPRNPPHFKVSFESTA 860
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g01301 860 CDD GT20_TPS 60 545 IPR001830 GO:0003824|GO:0005992
Accr9g01301 860 Pfam Glycosyltransferase family 20 60 545 IPR001830 GO:0003824|GO:0005992
Accr9g01301 860 FunFam Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 721 850 - -
Accr9g01301 860 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 60 548 - -
Accr9g01301 860 Gene3D Glycogen Phosphorylase B; 54 312 - -
Accr9g01301 860 CDD HAD_TPP 593 833 - -
Accr9g01301 860 Pfam Trehalose-phosphatase 595 828 IPR003337 GO:0003824|GO:0005992
Accr9g01301 860 Gene3D Glycogen Phosphorylase B; 313 529 - -
Accr9g01301 860 FunFam Alpha,alpha-trehalose-phosphate synthase 314 529 - -
Accr9g01301 860 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 28 840 IPR001830 GO:0003824|GO:0005992
Accr9g01301 860 NCBIfam trehalose-phosphatase 590 838 IPR003337 GO:0003824|GO:0005992
Accr9g01301 860 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 591 708 - -
Accr9g01301 860 SUPERFAMILY HAD-like 592 839 IPR036412 -
Accr9g01301 860 Gene3D - 591 701 IPR023214 -
Accr9g01301 860 Gene3D - 721 848 IPR023214 -
Accr9g01301 860 NCBIfam HAD-IIB family hydrolase 594 794 IPR006379 -
Accr9g01301 860 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 53 312 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr9g01301 Accr-Chr9 17361435 17364329 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr9g01301 1 860 Trehalose Biosynthesis Gene Families AT1G60140 73.287 0.0 1353
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr9g01301 K16055 - gmx:100775779 1502.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr9g01301 9 17361435 17364329 Accr9g01301 9 17361435 17364329 ECH