Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g01288 ATGATTTACTTCCTATGTCTGCCCTTCCCCTCGGCGAACATATCTTTGCCGATAATTCTAATTGCGGCCTTGCTTTACCATATTTTCTATTTCATTTATCAAATCCGCGTCAGCCGCCTCCGCCACCACTATTCTCCTGCTCCCGCCAACTTTCCCCTTGAATCTTGGATTTTCGAGCGCCTTCCCACCTCCACTTACTCCTCCTCCTCCACCGTCGAAGCAGGCGAACACAATGACCCCCCGCTGGAGTGTGTCGTCTGCTCGGACGAGTTCAATGAAGGAGACTTACTACGAGTGCTCCCGAACTGCGACCACTTCTTTCACCTCAATTGCATCGATGAGTGGCTCCGAACGAACAAGACTTGCCCACTGTGTCGAGAGGTCGTCAAGCCGCCGCCGATAATCATGTCACGGCATGAAAATACAGAAGCGTCAACTGGAGAAGAAAGTCAGTTGGAGAATTCGTCGAATGTAGATTTTCTTCAGCAAATTTGGTGCTCCAGGAACTCATGTCCGGTGATAGACTTAGAGCAAGTGATAATAGAGATTCCTGCTGAAGACCATCGCCAGAGTTAA 576 0.4948 MIYFLCLPFPSANISLPIILIAALLYHIFYFIYQIRVSRLRHHYSPAPANFPLESWIFERLPTSTYSSSSTVEAGEHNDPPLECVVCSDEFNEGDLLRVLPNCDHFFHLNCIDEWLRTNKTCPLCREVVKPPPIIMSRHENTEASTGEESQLENSSNVDFLQQIWCSRNSCPVIDLEQVIIEIPAEDHRQS 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g01288 191 SUPERFAMILY RING/U-box 83 132 - -
Accr9g01288 191 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 41 132 IPR013083 -
Accr9g01288 191 SMART ring_2 84 125 IPR001841 -
Accr9g01288 191 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ATL42 20 167 - -
Accr9g01288 191 CDD RING-H2_EL5-like 83 126 - -
Accr9g01288 191 ProSiteProfiles Zinc finger RING-type profile. 84 126 IPR001841 -
Accr9g01288 191 Pfam Ring finger domain 83 126 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr9g01288 Accr-Chr9 17047562 17048137 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr9g01288 18 131 C3H Transcription Factor Family AT2G17450 33.607 1.95e-18 77.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr9g01288 - K10664 pcin:129307892 144.05