Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g01258 ATGTCTCAAGTTGTTGAACCTGAGGGCTGGCAGCCTTGGAATTTTTCTACTAATGTGAAACGGGTAACATTTGCAGAGTATGAGTGTTTTGGGCCTGGGTCCAACACTTCCCAACGAGTGAGCTGGTCCAAGAATAATCTTGATTCCATGTTTGTGGAGCAAATGGCTAATCTGAGCTTCATTGATTCTGAGGGATGGCTTCAGAATCAACTTTTTTGA 219 0.4338 MSQVVEPEGWQPWNFSTNVKRVTFAEYECFGPGSNTSQRVSWSKNNLDSMFVEQMANLSFIDSEGWLQNQLF 72
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g01258 72 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 1 68 - -
Accr9g01258 72 Pfam Pectinesterase 1 62 IPR000070 GO:0030599|GO:0042545
Accr9g01258 72 Gene3D - 1 72 IPR012334 -
Accr9g01258 72 SUPERFAMILY Pectin lyase-like 1 68 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr9g01258 Accr-Chr9 16512924 16513911 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr9g01258 1 68 Carbohydrate Esterase AT1G05310 36.765 1.06e-10 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr9g01258 - - qsa:O6P43_026793 92.8189