Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g01255 ATGGCTTCCCGAAGATCCAATGTCGATTCTAATTCGAAATCGAGCGAGATTTCGTATTCTCCTAAATTGTCCGCTGAAGATGCGGCTGCGGCTCCATCTCCAGATTCTACCTCATCGTCAAATAGTACGGATTCTACGCCTCCAATTTCTCCATCGACCTCTCCGCCGTCGGGTTCTCCGCCTCCTACGATTCCTCCACTGCCTTCACCAAGCCCGTCTCCATCACCACCACATTCTTCGCCACCTCCACCATCGTCTCCTGCCCCTGAACAGTCACCACCACCACCGTCTCTTCCCCCACCGTCGTCTCCTCCCCCAGAGTCACCGTCACAGTCACCTCCACCACAATCACAATCCCCACCTCCACCCCGTCAATCTTCTCCGCTTCCATCCTCTCCTCCAACTCCACCTTCACCTCCAACTCCACCTTCACCTCCGCCTCTATCGCAGAATTCGTCCACACCACTGACACCAGGATCCCCAAATAATTCGTCAGCCACCGGCAACCCACTACCACCTCCTTCAACTGCCGTTCTCCCTGCAGTTGCCATTGTCCCGCCAAATACACCCAGCCCTCCTCTGCCACCAAGGGTGTGGGCCCCTCCTCCGCTGCCGCAATCACCTTCCACCACAAGCTCAAGCGGTTCTTCGGGTGGCTCCTCGTCGTCAAGAGATAGCAGCGGCGGTGGTAATTTAAATAATTACATTGGTTATGCCGTGGCTGGAGTGTTTGGTTTTACTCTGCTCGCCATATTGATTGTTTTCGTGGTAAGGAGGAAGAGAAAAGGAAAAGTGGCCCATGTCACACATTTTGGCGCTGCCAATAACTTACATAATAAACCAGGTACGGAAGGCTTTTACCATGCTCAGCAGTCTGGGAGCGCAAATTATTCACAAGAGGGCTATTATACTTCCCAATCTCTAACCTCTCCCAACAATGGAACTGGGAATCAAGCAGGAGCTGTACAACATTTTGTGAGTCCAGACTCGCCCTGGAATGGTCAGATATCTTTTAGCTATGAGCAGATTATGGAGATGACTAAGAGATTTTCTAGTGAAAATATTTTAGGGGAGGGGGGATTTGGATGTGTGCACAAGGGTTGGCTTTCAGATGGAAAAGAAGTTGCTGTGAAGCAGCTTAAAGCGGGCAGCGGCCAAGGTGAACGGGAATTTAGGGCGGAGGTTGAGATTATCAGCCGTGTTCATCATCGGCATTTGGTATCTTTAGTCGGCTATTGCATAGCTGATCACCGGAGAGTGCTTATCTATGAGTTTCTTCCAAATAAAACTCTCGAATATCACTTGCATGCCAGAGGAGTGAAAGTCTTAGATTGGGACATGAGGATGAAGATTGCAATTGGCTCTGCAAAAGGCTTAGCATATTTGCATGAAGACTGCACCCCAAAAATTATCCACAGAGATATTAAATCAGCGAACATACTTTTGGATAATGCGTACGAGGCAAAGGTTGCAGACTTTGGACTTGCTAGGCTACACGATGATGCTAACACGCACGTATCAACTCGGGTTATGGGGACTTTTGGGTACTTGGCCCCAGAGTACGCTTTTAGTGGAAAATTGACGGATAGATCAGATGTTTTCTCCTTTGGAGTTGTCCTCCTTGAACTTATAACAGGGAGGAAGCCTGTCGATCAAACTCGGCCTTTGGGAGAAGAGAGTTTGGTTGAGTGGGCCCGTCCACTTCTCCATCGTGCCATTGAGACCCGAGACTTCAGTGAATTTGCGGACGAAAGGCTTAACATGCAATTTGTGGAGAGCGAGATGAGCAGCATGATTGCAGCTGCCGCAGCTTGTGTGCGCTATTCTGCTCCAAATCGGCCTCGTATGGTTCAGGTGGTTAGAGCATTGGATAGTCGAAATGGATCATGTGATTTATCAAATGGTGTTAAATATGGTCAGAGCACTATTTATGATTCCGGCAACTACAGTGAAGACGCTATCATGGAGTTCAGGAAGATGGCCATAGATAGCTGTAGGGAATTTGAATTTGATAGTTACAGTAGAGAAAGCTCTTCTTCAGTAGAGCTTTCTCGACAACAACATTCATGGCTCAAGGGCGCTTCAAGTGGCGAGTCAGAGTCCCGGGCTTTCAATGCAAGAAGAAGGACTTAG 2133 0.488 MASRRSNVDSNSKSSEISYSPKLSAEDAAAAPSPDSTSSSNSTDSTPPISPSTSPPSGSPPPTIPPLPSPSPSPSPPHSSPPPPSSPAPEQSPPPPSLPPPSSPPPESPSQSPPPQSQSPPPPRQSSPLPSSPPTPPSPPTPPSPPPLSQNSSTPLTPGSPNNSSATGNPLPPPSTAVLPAVAIVPPNTPSPPLPPRVWAPPPLPQSPSTTSSSGSSGGSSSSRDSSGGGNLNNYIGYAVAGVFGFTLLAILIVFVVRRKRKGKVAHVTHFGAANNLHNKPGTEGFYHAQQSGSANYSQEGYYTSQSLTSPNNGTGNQAGAVQHFVSPDSPWNGQISFSYEQIMEMTKRFSSENILGEGGFGCVHKGWLSDGKEVAVKQLKAGSGQGEREFRAEVEIISRVHHRHLVSLVGYCIADHRRVLIYEFLPNKTLEYHLHARGVKVLDWDMRMKIAIGSAKGLAYLHEDCTPKIIHRDIKSANILLDNAYEAKVADFGLARLHDDANTHVSTRVMGTFGYLAPEYAFSGKLTDRSDVFSFGVVLLELITGRKPVDQTRPLGEESLVEWARPLLHRAIETRDFSEFADERLNMQFVESEMSSMIAAAAACVRYSAPNRPRMVQVVRALDSRNGSCDLSNGVKYGQSTIYDSGNYSEDAIMEFRKMAIDSCREFEFDSYSRESSSSVELSRQQHSWLKGASSGESESRAFNARRRT 710
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g01255 710 Gene3D Transferase(Phosphotransferase) domain 1 426 637 - -
Accr9g01255 710 SMART serkin_6 350 623 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr9g01255 710 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 248 672 IPR047117 -
Accr9g01255 710 MobiDBLite consensus disorder prediction 209 228 - -
Accr9g01255 710 ProSitePatterns Protein kinases ATP-binding region signature. 356 378 IPR017441 GO:0005524
Accr9g01255 710 MobiDBLite consensus disorder prediction 173 208 - -
Accr9g01255 710 Gene3D Phosphorylase Kinase; domain 1 318 425 - -
Accr9g01255 710 MobiDBLite consensus disorder prediction 679 701 - -
Accr9g01255 710 ProSiteProfiles Protein kinase domain profile. 350 627 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr9g01255 710 MobiDBLite consensus disorder prediction 1 21 - -
Accr9g01255 710 FunFam Proline-rich receptor-like protein kinase PERK8 324 425 - -
Accr9g01255 710 MobiDBLite consensus disorder prediction 49 152 - -
Accr9g01255 710 CDD STKc_IRAK 356 624 - -
Accr9g01255 710 MobiDBLite consensus disorder prediction 153 172 - -
Accr9g01255 710 SUPERFAMILY Protein kinase-like (PK-like) 328 623 IPR011009 -
Accr9g01255 710 MobiDBLite consensus disorder prediction 31 48 - -
Accr9g01255 710 FunFam proline-rich receptor-like protein kinase PERK8 426 638 - -
Accr9g01255 710 Pfam Protein tyrosine and serine/threonine kinase 353 623 IPR001245 GO:0004672|GO:0006468
Accr9g01255 710 PRINTS Proline rich extensin signature 44 56 - -
Accr9g01255 710 PRINTS Proline rich extensin signature 78 94 - -
Accr9g01255 710 PRINTS Proline rich extensin signature 56 77 - -
Accr9g01255 710 PRINTS Proline rich extensin signature 96 113 - -
Accr9g01255 710 MobiDBLite consensus disorder prediction 1 228 - -
Accr9g01255 710 MobiDBLite consensus disorder prediction 679 710 - -
Accr9g01255 710 ProSitePatterns Serine/Threonine protein kinases active-site signature. 470 482 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr9g01255 Accr-Chr9 16443265 16448188 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr9g01255 226 700 Trihelix Transcription Factor Family AT1G70460 60.619 0.0 557
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Accr9g01255 PK_Tyr_Ser-Thr 1.4e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr9g01255 - - pcin:129322412 861.292