Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g01247 ATGATAAATACTTCTTCATCAAAAGAATCATCATCTGATCCTATCTCGTTAATGTTGCCAGAGATGACAGAGAAGAAGATCAATGAGATTGGAGGCCATAATATCGTAAAGATCCTAGAAAAGAAGGTTTATCAGAGTGATTTGGGTAAAACTAATGATCGTTTATCAATTCCAGAGAAGATGATTTTGCTGAAAGCTGAAGATTTTATTAAACCTGAAGAGATTAATTTATTAATGACAAAAGATCCAAAAACTAATAAGCTCAACGGTATTCCTGTGTTGGTTTTGGATCCAAATCTTAAAGAGTTCAACTTAGTATTGAAAAGGTGGCAAATGACAACTTCCATTACTTATAATTTGACTCGTCGTTGGTATGATGTGTTGAAGTGCAATAATTTTCAAGTTGGCGATGTGTTGCAATTATGGTCATTTAGAGAACTCGATGATCAACTTGGATTTGCATTAGTCAGGGTTTAG 477 0.3375 MINTSSSKESSSDPISLMLPEMTEKKINEIGGHNIVKILEKKVYQSDLGKTNDRLSIPEKMILLKAEDFIKPEEINLLMTKDPKTNKLNGIPVLVLDPNLKEFNLVLKRWQMTTSITYNLTRRWYDVLKCNNFQVGDVLQLWSFRELDDQLGFALVRV 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g01247 158 SUPERFAMILY DNA-binding pseudobarrel domain 38 146 IPR015300 -
Accr9g01247 158 Gene3D - 31 157 IPR015300 -
Accr9g01247 158 PANTHER B3 DOMAIN PLANT PROTEIN-RELATED 9 158 IPR005508 GO:0003677
Accr9g01247 158 Pfam B3 domain-containing protein At2g31720-like 32 129 IPR005508 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr9g01247 Accr-Chr9 16376738 16377214 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr9g01247 27 155 B3 DNA Binding Superfamily AT1G05930 30.000 5.94e-12 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr9g01247 - - pcin:129322468 132.88