Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g01216 ATGGCGGTCACAGTCAGATGTGGACATTGTACAAGCCTCCTCTCTGTTAATATGATGAAAGCTTCTTTTGTCCCCTTACACCTTTTAGCTTCCTTTTCTCATCTTCAGCCAAAAGAGGAGAGTCCAGAAGAAGAAGCAAACAAGACTTTTGAAAGCCATGACCATAATGGAAAATCCATAATGACCTATTCTGATTGTGAGGAAGAGAATGCAATTCCCATGAGCATTGTGGCAAGCAAACCCCCAGAGAAGAGACAGCGAACACCATCAGCTTATAACCTCTTCATCAAAGAAGAGATCAGAAGGCTAAAGGCTGAAAACCCTGACATGGCTCACAAAGAGGCTTTTAGCACAGCTGCAAAAAACTGGGCTTGCAAAGGAGATGAAGAAAGCTGTAGCCAGACACAGCAACTTGGGGATCTTGAAGATGATGAGGCTAAAGAAGAGGAGGAGGAAGAAGAAGGAGAACGCCAAGGTTTCCGTGAAAGAAAGGTTCCAAGGAATTCAATCTGGTCAAGGACACCATTTGAGTGA 534 0.4401 MAVTVRCGHCTSLLSVNMMKASFVPLHLLASFSHLQPKEESPEEEANKTFESHDHNGKSIMTYSDCEEENAIPMSIVASKPPEKRQRTPSAYNLFIKEEIRRLKAENPDMAHKEAFSTAAKNWACKGDEESCSQTQQLGDLEDDEAKEEEEEEEGERQGFRERKVPRNSIWSRTPFE 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g01216 177 MobiDBLite consensus disorder prediction 154 168 - -
Accr9g01216 177 SUPERFAMILY HMG-box 78 130 IPR036910 -
Accr9g01216 177 MobiDBLite consensus disorder prediction 123 177 - -
Accr9g01216 177 Gene3D High mobility group box domain 78 169 IPR036910 -
Accr9g01216 177 MobiDBLite consensus disorder prediction 37 58 - -
Accr9g01216 177 CDD HMG-box_SF 87 130 - -
Accr9g01216 177 PANTHER PROTEIN YABBY 6-RELATED 2 125 IPR006780 GO:0007275
Accr9g01216 177 Pfam YABBY protein 2 124 IPR006780 GO:0007275
Accr9g01216 177 Coils Coil 138 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr9g01216 Accr-Chr9 15826388 15827638 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr9g01216 1 177 C2C2-YABBY Transcription Factor Family AT1G23420 54.787 1.92e-47 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Accr9g01216 YABBY 2.3e-42 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr9g01216 K25796 - gmx:100804172 239.58