Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g01215 ATGTCAACACTCAACCGTCTTTTTGGCCTTCCAGAGCAAATATGTTACGTTCAATGTGGATTCTGCGGCACCATTTTAATGGTGAGCGTCCCATGCACTAGTTTGTCTATGGCGGTCACAGTCAGATGTGGACATTGTACAAGCCTCCTCTCTGTTAATATGATGAAAGCTTCTTTTGTCCCCTTACACCTTTTAGCTTCCTTTTCTCATCTTCAGCCAAAAGAGGAGAGTCCAGAAGAAGAAGCAAACAAGACTTTTGAAAGCCATGACCATAATGGAAAATCCATAATGACCTATTCTGATTGTGAGGAAGAGAATGCAATTCCCATGAGCATTGTGGCAAGCAAACCCCCAGAGAAGAGACAGCGAACACCATCAGCTTATAACCTCTTCATCAAAGAAGAGATCAGAAGGCTAAAGGCTGAAAACCCTGACATGGCTCACAAAGAGGCTTTTAGCACAGCTGCAAAAAACTGGGCTTGCAAAGGAGATGAAGAAAGCTGTAGCCAGACACAGCAACTTGGGGATCTTGAAGATGATGAGGCTAAAGAAGAGGAGGAGGAAGAAGAAGGAGAACGCCAAGGTTTCCGTGAAAGAAAGGTTCCAAGGAATTCAATCTGGTCAAGGACACCATTTGAGTGA 642 0.4408 MSTLNRLFGLPEQICYVQCGFCGTILMVSVPCTSLSMAVTVRCGHCTSLLSVNMMKASFVPLHLLASFSHLQPKEESPEEEANKTFESHDHNGKSIMTYSDCEEENAIPMSIVASKPPEKRQRTPSAYNLFIKEEIRRLKAENPDMAHKEAFSTAAKNWACKGDEESCSQTQQLGDLEDDEAKEEEEEEEGERQGFRERKVPRNSIWSRTPFE 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g01215 213 Pfam YABBY protein 11 160 IPR006780 GO:0007275
Accr9g01215 213 MobiDBLite consensus disorder prediction 190 204 - -
Accr9g01215 213 MobiDBLite consensus disorder prediction 159 213 - -
Accr9g01215 213 Coils Coil 174 194 - -
Accr9g01215 213 CDD HMG-box_SF 123 166 - -
Accr9g01215 213 Gene3D High mobility group box domain 111 198 IPR036910 -
Accr9g01215 213 PANTHER PROTEIN YABBY 6-RELATED 11 161 IPR006780 GO:0007275
Accr9g01215 213 SUPERFAMILY HMG-box 114 166 IPR036910 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr9g01215 Accr-Chr9 15826129 15827638 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr9g01215 2 213 C2C2-YABBY Transcription Factor Family AT1G23420 58.296 6.97e-70 212
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Accr9g01215 YABBY 4e-59 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr9g01215 K25796 - gmx:100804172 305.449