Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g01170 ATGCAGCAAATTGGGGTACGAGGTTGCTGTTTTGGCATTGCAAACATGATTTTGGTTAAGAGGATTAGAGAAGCATTATACTCTGCGCTACTTCTTCAGGATATATCATTTTTTGACTCTGAAACAGTTGGTGATTTGACAAGCAGGCTTGGGGCAGATTGTCAACAAGTGTCACGTGTTATTGGAAATGATCTTAACTTGATATTGCGCAATGTTCTTCAGGGAGCAGGTTCATTGATCTACCTGTTGGTTTTGTCTTGGCCACTTGGATTATGTACAGTGGGCATATGCACTATATTATCAGCTGTTATGCTAATTTATGGAAGGTATCAGAAAAAGGCTGCAAGGTTGGTCCAAGAAGTTACTGCCTCTGCAAATCAAGTAGCTCAGGAAACATTATCTCTCATTAGGACTGTTCGAGTTCATGGAACTGAAGGAGAAGAACTTGGAAGATACAAATGGTGGCTGGGGAAGTTAGCTGATATAAGTTTGCGACAAAGTGCTGCTTATGGATTTTGGAATTTAAGTTTCAACAGTCTTTATCATTCAACTCAGGTTATTGCCGTCCTATTTGGAGGAATGGCCATTCTAGCAGGTCATATTACCGCAGAGAAACTCACCAAGTTCATACTATACAGTGAATGGCTTATTTATTCAACCTGGTGGGTTGGTGACAATATATCCTCTTTGATGCAATCAGTTGGAGCCAGTGAAAAAGTATTTCGATTGATGGATCTCTTACCAAGTAGCCAATTCATAGAAAGGGGGGTGAAGTTACAGGGATTAACGGGGCTTATTGAGTTCATAGATGTTTCTTTTTACTATCCTTCAAGGCCAACGGTACCTGTAGTGCAACATGTCAGCTTTTCTGTTCATCCTGGTGAGGTGGTCGCAATTGTTGGTTTTAGTGGTAGTGGAAAAAGCACACTGGTAAACCTTTTGCTCCAGCTATATGAGCCAACAAATGGCCAGATTTTGATTGATGGCCACCCTCTTAAAGAGTTGGACATCATGTGGTGGAGAGAAAGAATTGGATATGTGGGACAGGAGCCGAAGCTCTTTCGCATGGATATTAGTTCAAACATCAGCTATGGATGCACCCATTATATAAAGCAGGAGGATATTGAATGGGCCGCCAAGCAGGCTTATGCTCATGACTTCATCTCAGCACTTCCTAATGGTTATGAAACACTTGTTGATGATGATCTATTAAGTGGGGGACAAAGGCAGCGGATTGCCATTGCAAGGGCCATTATTAGGGATCCCTCTATTTTGGTCCTTGATGAAGCCACCAGTGCTCTGGATGCTGAGAGTGAATATAATGTCCAGGGTGTCTTTCGATCTGTCAGAAGTGACTTAACGACGAGAAGTGTCATAGTCATTGCTCACAGGCTTTCTACCATAAAAGCAGCTGACAAGATCGTGGTAATGGATGGTGGTCAAATTGTTGAGATTGGAAGTCACAGGGAGCTTCTCTTAAAAGATGGTTTGTATGCACGATTGACTAGAAAACAGGCTGACGCAATGTCATGA 1533 0.4214 MQQIGVRGCCFGIANMILVKRIREALYSALLLQDISFFDSETVGDLTSRLGADCQQVSRVIGNDLNLILRNVLQGAGSLIYLLVLSWPLGLCTVGICTILSAVMLIYGRYQKKAARLVQEVTASANQVAQETLSLIRTVRVHGTEGEELGRYKWWLGKLADISLRQSAAYGFWNLSFNSLYHSTQVIAVLFGGMAILAGHITAEKLTKFILYSEWLIYSTWWVGDNISSLMQSVGASEKVFRLMDLLPSSQFIERGVKLQGLTGLIEFIDVSFYYPSRPTVPVVQHVSFSVHPGEVVAIVGFSGSGKSTLVNLLLQLYEPTNGQILIDGHPLKELDIMWWRERIGYVGQEPKLFRMDISSNISYGCTHYIKQEDIEWAAKQAYAHDFISALPNGYETLVDDDLLSGGQRQRIAIARAIIRDPSILVLDEATSALDAESEYNVQGVFRSVRSDLTTRSVIVIAHRLSTIKAADKIVVMDGGQIVEIGSHRELLLKDGLYARLTRKQADAMS 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g01170 510 PANTHER ABC TRANSPORTER B FAMILY 6 502 IPR039421 -
Accr9g01170 510 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 6 232 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Accr9g01170 510 FunFam Multidrug ABC transporter ATP-binding protein 258 509 - -
Accr9g01170 510 Pfam ABC transporter 285 432 IPR003439 GO:0005524
Accr9g01170 510 SUPERFAMILY ABC transporter transmembrane region 6 248 IPR036640 GO:0005524|GO:0016020
Accr9g01170 510 ProSitePatterns ABC transporters family signature. 404 418 IPR017871 GO:0005524|GO:0016887
Accr9g01170 510 Pfam ABC transporter transmembrane region 7 217 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Accr9g01170 510 Gene3D ABC transporter type 1, transmembrane domain 9 263 IPR036640 GO:0005524|GO:0016020
Accr9g01170 510 Gene3D - 264 506 IPR027417 -
Accr9g01170 510 CDD ABC_6TM_TAP 5 240 - -
Accr9g01170 510 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 259 505 IPR027417 -
Accr9g01170 510 SMART AAA_5 293 481 IPR003593 GO:0016887
Accr9g01170 510 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 266 504 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr9g01170 Accr-Chr9 14734014 14744670 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr9g01170 21 508 Calmodulin-binding Proteins AT2G36910 34.608 3.22e-75 256
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr9g01170 - - gmx:100775951 860.907