Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g01169 ATGTTTAACTTCTGGAATATGCAGGTCAAAATCTTTGGGGTACGAGGTTGCTGTTTTGGCATTGCAAACATGATTTTGGTTAAGAGGATTAGAGAAGCATTATACTCTGCGCTACTTCTTCAGGATATATCATTTTTTGACTCTGAAACAGTTGGTGATTTGACAAGCAGGCTTGGGGCAGATTGTCAACAAGTGTCACGTGTTATTGGAAATGATCTTAACTTGATATTGCGCAATGTTCTTCAGGGAGCAGGTTCATTGATCTACCTGTTGGTTTTGTCTTGGCCACTTGGATTATGTACAGTGGGCATATGCACTATATTATCAGCTGTTATGCTAATTTATGGAAGGTATCAGAAAAAGGCTGCAAGGTTGGTCCAAGAAGTTACTGCCTCTGCAAATCAAGTAGCTCAGGAAACATTATCTCTCATTAGGACTGTTCGAGTTCATGGAACTGAAGGAGAAGAACTTGGAAGATACAAATGGTGGCTGGGGAAGTTAGCTGATATAAGTTTGCGACAAAGTGCTGCTTATGGATTTTGGAATTTAAGTTTCAACAGTCTTTATCATTCAACTCAGGTTATTGCCGTCCTATTTGGAGGAATGGCCATTCTAGCAGGTCATATTACCGCAGAGAAACTCACCAAGTTCATACTATACAGTGAATGGCTTATTTATTCAACCTGGTGGGTTGGTGACAATATATCCTCTTTGATGCAATCAGTTGGAGCCAGTGAAAAAGTATTTCGATTGATGGATCTCTTACCAAGTAGCCAATTCATAGAAAGGGGGGTGAAGTTACAGGGATTAACGGGGCTTATTGAGTTCATAGATGTTTCTTTTTACTATCCTTCAAGGCCAACGGTACCTGTAGTGCAACATGTCAGCTTTTCTGTTCATCCTGGTGAGGTGGTCGCAATTGTTGGTTTTAGTGGTAGTGGAAAAAGCACACTGGTAAACCTTTTGCTCCAGCTATATGAGCCAACAAATGGCCAGATTTTGATTGATGGCCACCCTCTTAAAGAGTTGGACATCATGTGGTGGAGAGAAAGAATTGGATATGTGGGACAGGAGCCGAAGCTCTTTCGCATGGATATTAGTTCAAACATCAGCTATGGATGCACCCATTATATAAAGCAGGAGGATATTGAATGGGCCGCCAAGCAGGCTTATGCTCATGACTTCATCTCAGCACTTCCTAATGGTTATGAAACACTTGTTGATGATGATCTATTAAGTGGGGGACAAAGGCAGCGGATTGCCATTGCAAGGGCCATTATTAGGGATCCCTCTATTTTGGTCCTTGATGAAGCCACCAGTGCTCTGGATGCTGAGAGTGAATATAATGTCCAGGGTGTCTTTCGATCTGTCAGAAGTGACTTAACGACGAGAAGTGTCATAGTCATTGCTCACAGGCTTTCTACCATAAAAGCAGCTGACAAGATCGTGGTAATGGATGGTGGTCAAATTGTTGAGATTGGAAGTCACAGGGAGCTTCTCTTAAAAGATGGTTTGTATGCACGATTGACTAGAAAACAGGCTGACGCAATGTCATGA 1557 0.4194 MFNFWNMQVKIFGVRGCCFGIANMILVKRIREALYSALLLQDISFFDSETVGDLTSRLGADCQQVSRVIGNDLNLILRNVLQGAGSLIYLLVLSWPLGLCTVGICTILSAVMLIYGRYQKKAARLVQEVTASANQVAQETLSLIRTVRVHGTEGEELGRYKWWLGKLADISLRQSAAYGFWNLSFNSLYHSTQVIAVLFGGMAILAGHITAEKLTKFILYSEWLIYSTWWVGDNISSLMQSVGASEKVFRLMDLLPSSQFIERGVKLQGLTGLIEFIDVSFYYPSRPTVPVVQHVSFSVHPGEVVAIVGFSGSGKSTLVNLLLQLYEPTNGQILIDGHPLKELDIMWWRERIGYVGQEPKLFRMDISSNISYGCTHYIKQEDIEWAAKQAYAHDFISALPNGYETLVDDDLLSGGQRQRIAIARAIIRDPSILVLDEATSALDAESEYNVQGVFRSVRSDLTTRSVIVIAHRLSTIKAADKIVVMDGGQIVEIGSHRELLLKDGLYARLTRKQADAMS 518
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Accr9g01169 518 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 274 512 IPR003439 GO:0005524
Accr9g01169 518 Gene3D ABC transporter type 1, transmembrane domain 17 271 IPR036640 GO:0005524|GO:0016020
Accr9g01169 518 FunFam Multidrug ABC transporter ATP-binding protein 266 517 - -
Accr9g01169 518 Pfam ABC transporter 293 440 IPR003439 GO:0005524
Accr9g01169 518 PANTHER ABC TRANSPORTER B FAMILY 14 510 IPR039421 -
Accr9g01169 518 SUPERFAMILY ABC transporter transmembrane region 13 256 IPR036640 GO:0005524|GO:0016020
Accr9g01169 518 SMART AAA_5 301 489 IPR003593 GO:0016887
Accr9g01169 518 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 14 240 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Accr9g01169 518 ProSitePatterns ABC transporters family signature. 412 426 IPR017871 GO:0005524|GO:0016887
Accr9g01169 518 Pfam ABC transporter transmembrane region 15 225 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Accr9g01169 518 CDD ABC_6TM_TAP 13 248 - -
Accr9g01169 518 Gene3D - 272 514 IPR027417 -
Accr9g01169 518 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 267 513 IPR027417 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Accr9g01169 Accr-Chr9 14734014 14744915 Dispersed/Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr9g01169 29 516 Calmodulin-binding Proteins AT2G36910 34.608 2.60e-75 256
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr9g01169 - - pcin:129311051 868.996