Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Accr9g01169 | ATGTTTAACTTCTGGAATATGCAGGTCAAAATCTTTGGGGTACGAGGTTGCTGTTTTGGCATTGCAAACATGATTTTGGTTAAGAGGATTAGAGAAGCATTATACTCTGCGCTACTTCTTCAGGATATATCATTTTTTGACTCTGAAACAGTTGGTGATTTGACAAGCAGGCTTGGGGCAGATTGTCAACAAGTGTCACGTGTTATTGGAAATGATCTTAACTTGATATTGCGCAATGTTCTTCAGGGAGCAGGTTCATTGATCTACCTGTTGGTTTTGTCTTGGCCACTTGGATTATGTACAGTGGGCATATGCACTATATTATCAGCTGTTATGCTAATTTATGGAAGGTATCAGAAAAAGGCTGCAAGGTTGGTCCAAGAAGTTACTGCCTCTGCAAATCAAGTAGCTCAGGAAACATTATCTCTCATTAGGACTGTTCGAGTTCATGGAACTGAAGGAGAAGAACTTGGAAGATACAAATGGTGGCTGGGGAAGTTAGCTGATATAAGTTTGCGACAAAGTGCTGCTTATGGATTTTGGAATTTAAGTTTCAACAGTCTTTATCATTCAACTCAGGTTATTGCCGTCCTATTTGGAGGAATGGCCATTCTAGCAGGTCATATTACCGCAGAGAAACTCACCAAGTTCATACTATACAGTGAATGGCTTATTTATTCAACCTGGTGGGTTGGTGACAATATATCCTCTTTGATGCAATCAGTTGGAGCCAGTGAAAAAGTATTTCGATTGATGGATCTCTTACCAAGTAGCCAATTCATAGAAAGGGGGGTGAAGTTACAGGGATTAACGGGGCTTATTGAGTTCATAGATGTTTCTTTTTACTATCCTTCAAGGCCAACGGTACCTGTAGTGCAACATGTCAGCTTTTCTGTTCATCCTGGTGAGGTGGTCGCAATTGTTGGTTTTAGTGGTAGTGGAAAAAGCACACTGGTAAACCTTTTGCTCCAGCTATATGAGCCAACAAATGGCCAGATTTTGATTGATGGCCACCCTCTTAAAGAGTTGGACATCATGTGGTGGAGAGAAAGAATTGGATATGTGGGACAGGAGCCGAAGCTCTTTCGCATGGATATTAGTTCAAACATCAGCTATGGATGCACCCATTATATAAAGCAGGAGGATATTGAATGGGCCGCCAAGCAGGCTTATGCTCATGACTTCATCTCAGCACTTCCTAATGGTTATGAAACACTTGTTGATGATGATCTATTAAGTGGGGGACAAAGGCAGCGGATTGCCATTGCAAGGGCCATTATTAGGGATCCCTCTATTTTGGTCCTTGATGAAGCCACCAGTGCTCTGGATGCTGAGAGTGAATATAATGTCCAGGGTGTCTTTCGATCTGTCAGAAGTGACTTAACGACGAGAAGTGTCATAGTCATTGCTCACAGGCTTTCTACCATAAAAGCAGCTGACAAGATCGTGGTAATGGATGGTGGTCAAATTGTTGAGATTGGAAGTCACAGGGAGCTTCTCTTAAAAGATGGTTTGTATGCACGATTGACTAGAAAACAGGCTGACGCAATGTCATGA | 1557 | 0.4194 | MFNFWNMQVKIFGVRGCCFGIANMILVKRIREALYSALLLQDISFFDSETVGDLTSRLGADCQQVSRVIGNDLNLILRNVLQGAGSLIYLLVLSWPLGLCTVGICTILSAVMLIYGRYQKKAARLVQEVTASANQVAQETLSLIRTVRVHGTEGEELGRYKWWLGKLADISLRQSAAYGFWNLSFNSLYHSTQVIAVLFGGMAILAGHITAEKLTKFILYSEWLIYSTWWVGDNISSLMQSVGASEKVFRLMDLLPSSQFIERGVKLQGLTGLIEFIDVSFYYPSRPTVPVVQHVSFSVHPGEVVAIVGFSGSGKSTLVNLLLQLYEPTNGQILIDGHPLKELDIMWWRERIGYVGQEPKLFRMDISSNISYGCTHYIKQEDIEWAAKQAYAHDFISALPNGYETLVDDDLLSGGQRQRIAIARAIIRDPSILVLDEATSALDAESEYNVQGVFRSVRSDLTTRSVIVIAHRLSTIKAADKIVVMDGGQIVEIGSHRELLLKDGLYARLTRKQADAMS | 518 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Accr9g01169 | 518 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 274 | 512 | IPR003439 | GO:0005524 | |
Accr9g01169 | 518 | Gene3D | ABC transporter type 1, transmembrane domain | 17 | 271 | IPR036640 | GO:0005524|GO:0016020 | |
Accr9g01169 | 518 | FunFam | Multidrug ABC transporter ATP-binding protein | 266 | 517 | - | - | |
Accr9g01169 | 518 | Pfam | ABC transporter | 293 | 440 | IPR003439 | GO:0005524 | |
Accr9g01169 | 518 | PANTHER | ABC TRANSPORTER B FAMILY | 14 | 510 | IPR039421 | - | |
Accr9g01169 | 518 | SUPERFAMILY | ABC transporter transmembrane region | 13 | 256 | IPR036640 | GO:0005524|GO:0016020 | |
Accr9g01169 | 518 | SMART | AAA_5 | 301 | 489 | IPR003593 | GO:0016887 | |
Accr9g01169 | 518 | ProSiteProfiles | ABC transporter integral membrane type-1 fused domain profile. | 14 | 240 | IPR011527 | GO:0005524|GO:0016020|GO:0055085|GO:0140359 | |
Accr9g01169 | 518 | ProSitePatterns | ABC transporters family signature. | 412 | 426 | IPR017871 | GO:0005524|GO:0016887 | |
Accr9g01169 | 518 | Pfam | ABC transporter transmembrane region | 15 | 225 | IPR011527 | GO:0005524|GO:0016020|GO:0055085|GO:0140359 | |
Accr9g01169 | 518 | CDD | ABC_6TM_TAP | 13 | 248 | - | - | |
Accr9g01169 | 518 | Gene3D | - | 272 | 514 | IPR027417 | - | |
Accr9g01169 | 518 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 267 | 513 | IPR027417 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Accr9g01169 | Accr-Chr9 | 14734014 | 14744915 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Accr9g01169 | 29 | 516 | Calmodulin-binding Proteins | AT2G36910 | 34.608 | 2.60e-75 | 256 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Accr9g01169 | - | - | pcin:129311051 | 868.996 |