Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Accr9g01160 | ATGGAAGAAGCTTTTAGGCGTCTCAACGGCTGCAATCCCCAAGACTCATCCTCCGATCACCACCTCAGGAAGTGCTCCTCCGCCACCAACAAGAGGGCTTCCAAAGATAATGGCGCCGGCGGTATAAAGTACCGCGGAGTTAGGCGTAGGCCCTGGGGCCGTTACGCCGCCGAGATAAGGGACCCACTGTCCAAGGAGCGGCGTTGGCTCGGTACCTTCGACACGGCGGAGGAAGCCGCCTGTGCCTACGACTGCGCCGCCCGAGCCATGCGTGGCCTTAAAGCTCGGACCAACTTTGTCTACCCAAATCTCATCTCTTCTCTTTACTCTCTTCCTTACAATCTCTTGCCTCCTTCTGTCAACTTTCCCAAACAATCTCAGACGACGTCGTCCGTTAACGTTAACAATAACCTCCATAACAACCACCACGTGGGAGCTTCTAATTGGTCCAACCCTCGTCCCTGTTCAACCCACCCCCTCCGAAACCCAACCTCGAACATGATTATGCACCCTTCTGTGGTTCCTCCTTCGCCGTCGTTGTCCTCGTACACCTGTGCCACGTGTACTTGTCACCGAGGTTGCTGTTTGATGAATTCTTCTTCTGGTGGTGGCACTAATTCTTCTGCTTCCGTCTCGATGACCACCACAACCCATCAAAATGGAATAATGACCAAGACTGGTGATTGTGAAGCTGTTGGTCAATTTGGGTTGATTCCAAGAGAATCTTCAGACTCAGGGCTGTTGGAGGAGATTGTTCACAAATTTATGTTAACTTCAAAGCCCAAGAAACTTGAGACTACTCCAGAATTACCACCTCAAAGTCAACCTCAGCCTCATTTAGTGCCTGATCCTACGTTTGTTTCTGCTTCTCAATGCCATTACGAAACCAATTTGGACAACGACCAAGGTTTTCTGCCCATGCAACAACAACAGTTTGAGGGTTTTGATCATGAGCAGGCTATGCATCTAGGCAACGGTCAACAGTTCATGATGAACCATGCAGATTTCTCAGTCACGCAAGATCTTGTTCGTTATCAAGAGATTTTTAATGCCTTCGCAGCTAGCGTCCAAAATGCTTAA | 1080 | 0.4954 | MEEAFRRLNGCNPQDSSSDHHLRKCSSATNKRASKDNGAGGIKYRGVRRRPWGRYAAEIRDPLSKERRWLGTFDTAEEAACAYDCAARAMRGLKARTNFVYPNLISSLYSLPYNLLPPSVNFPKQSQTTSSVNVNNNLHNNHHVGASNWSNPRPCSTHPLRNPTSNMIMHPSVVPPSPSLSSYTCATCTCHRGCCLMNSSSGGGTNSSASVSMTTTTHQNGIMTKTGDCEAVGQFGLIPRESSDSGLLEEIVHKFMLTSKPKKLETTPELPPQSQPQPHLVPDPTFVSASQCHYETNLDNDQGFLPMQQQQFEGFDHEQAMHLGNGQQFMMNHADFSVTQDLVRYQEIFNAFAASVQNA | 359 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Accr9g01160 | 359 | PRINTS | Ethylene responsive element binding protein signature | 66 | 82 | IPR001471 | GO:0003700|GO:0006355 | |
Accr9g01160 | 359 | PRINTS | Ethylene responsive element binding protein signature | 44 | 55 | IPR001471 | GO:0003700|GO:0006355 | |
Accr9g01160 | 359 | Pfam | AP2 domain | 43 | 92 | IPR001471 | GO:0003700|GO:0006355 | |
Accr9g01160 | 359 | CDD | AP2 | 43 | 99 | IPR001471 | GO:0003700|GO:0006355 | |
Accr9g01160 | 359 | FunFam | Ethylene-responsive transcription factor 2 | 43 | 101 | - | - | |
Accr9g01160 | 359 | SUPERFAMILY | DNA-binding domain | 43 | 100 | IPR016177 | GO:0003677 | |
Accr9g01160 | 359 | PANTHER | AP2 DOMAIN CLASS TRANSCRIPTION FACTOR | 29 | 207 | - | - | |
Accr9g01160 | 359 | MobiDBLite | consensus disorder prediction | 1 | 44 | - | - | |
Accr9g01160 | 359 | Gene3D | AP2/ERF domain | 42 | 101 | IPR036955 | GO:0003700|GO:0006355 | |
Accr9g01160 | 359 | SMART | rav1_2 | 43 | 106 | IPR001471 | GO:0003700|GO:0006355 | |
Accr9g01160 | 359 | ProSiteProfiles | AP2/ERF domain profile. | 43 | 100 | IPR001471 | GO:0003700|GO:0006355 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Accr9g01160 | Accr-Chr9 | 14607457 | 14608536 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Accr9g01160 | 1 | 102 | AP2-EREBP Transcription Factor Family | AT1G24590 | 62.393 | 6.24e-40 | 141 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | AP2/ERF-ERF | Accr9g01160 | AP2 | 5.2e-12 | CL0081 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Accr9g01160 | - | - | pcin:129322403 | 405.216 |