Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g01160 ATGGAAGAAGCTTTTAGGCGTCTCAACGGCTGCAATCCCCAAGACTCATCCTCCGATCACCACCTCAGGAAGTGCTCCTCCGCCACCAACAAGAGGGCTTCCAAAGATAATGGCGCCGGCGGTATAAAGTACCGCGGAGTTAGGCGTAGGCCCTGGGGCCGTTACGCCGCCGAGATAAGGGACCCACTGTCCAAGGAGCGGCGTTGGCTCGGTACCTTCGACACGGCGGAGGAAGCCGCCTGTGCCTACGACTGCGCCGCCCGAGCCATGCGTGGCCTTAAAGCTCGGACCAACTTTGTCTACCCAAATCTCATCTCTTCTCTTTACTCTCTTCCTTACAATCTCTTGCCTCCTTCTGTCAACTTTCCCAAACAATCTCAGACGACGTCGTCCGTTAACGTTAACAATAACCTCCATAACAACCACCACGTGGGAGCTTCTAATTGGTCCAACCCTCGTCCCTGTTCAACCCACCCCCTCCGAAACCCAACCTCGAACATGATTATGCACCCTTCTGTGGTTCCTCCTTCGCCGTCGTTGTCCTCGTACACCTGTGCCACGTGTACTTGTCACCGAGGTTGCTGTTTGATGAATTCTTCTTCTGGTGGTGGCACTAATTCTTCTGCTTCCGTCTCGATGACCACCACAACCCATCAAAATGGAATAATGACCAAGACTGGTGATTGTGAAGCTGTTGGTCAATTTGGGTTGATTCCAAGAGAATCTTCAGACTCAGGGCTGTTGGAGGAGATTGTTCACAAATTTATGTTAACTTCAAAGCCCAAGAAACTTGAGACTACTCCAGAATTACCACCTCAAAGTCAACCTCAGCCTCATTTAGTGCCTGATCCTACGTTTGTTTCTGCTTCTCAATGCCATTACGAAACCAATTTGGACAACGACCAAGGTTTTCTGCCCATGCAACAACAACAGTTTGAGGGTTTTGATCATGAGCAGGCTATGCATCTAGGCAACGGTCAACAGTTCATGATGAACCATGCAGATTTCTCAGTCACGCAAGATCTTGTTCGTTATCAAGAGATTTTTAATGCCTTCGCAGCTAGCGTCCAAAATGCTTAA 1080 0.4954 MEEAFRRLNGCNPQDSSSDHHLRKCSSATNKRASKDNGAGGIKYRGVRRRPWGRYAAEIRDPLSKERRWLGTFDTAEEAACAYDCAARAMRGLKARTNFVYPNLISSLYSLPYNLLPPSVNFPKQSQTTSSVNVNNNLHNNHHVGASNWSNPRPCSTHPLRNPTSNMIMHPSVVPPSPSLSSYTCATCTCHRGCCLMNSSSGGGTNSSASVSMTTTTHQNGIMTKTGDCEAVGQFGLIPRESSDSGLLEEIVHKFMLTSKPKKLETTPELPPQSQPQPHLVPDPTFVSASQCHYETNLDNDQGFLPMQQQQFEGFDHEQAMHLGNGQQFMMNHADFSVTQDLVRYQEIFNAFAASVQNA 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g01160 359 PRINTS Ethylene responsive element binding protein signature 66 82 IPR001471 GO:0003700|GO:0006355
Accr9g01160 359 PRINTS Ethylene responsive element binding protein signature 44 55 IPR001471 GO:0003700|GO:0006355
Accr9g01160 359 Pfam AP2 domain 43 92 IPR001471 GO:0003700|GO:0006355
Accr9g01160 359 CDD AP2 43 99 IPR001471 GO:0003700|GO:0006355
Accr9g01160 359 FunFam Ethylene-responsive transcription factor 2 43 101 - -
Accr9g01160 359 SUPERFAMILY DNA-binding domain 43 100 IPR016177 GO:0003677
Accr9g01160 359 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 29 207 - -
Accr9g01160 359 MobiDBLite consensus disorder prediction 1 44 - -
Accr9g01160 359 Gene3D AP2/ERF domain 42 101 IPR036955 GO:0003700|GO:0006355
Accr9g01160 359 SMART rav1_2 43 106 IPR001471 GO:0003700|GO:0006355
Accr9g01160 359 ProSiteProfiles AP2/ERF domain profile. 43 100 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr9g01160 Accr-Chr9 14607457 14608536 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr9g01160 1 102 AP2-EREBP Transcription Factor Family AT1G24590 62.393 6.24e-40 141
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Accr9g01160 AP2 5.2e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr9g01160 - - pcin:129322403 405.216