Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g01155 ATGGATTTTGAGGAGCAAGAGGAGGAACTTGGGATGGGACCCACAGGGAGTTACGACTCCATGGGGAATCCGACCCGAATGAAAATGGCGGGTGGTGGGGAGGTCATGGTGGTTCAGGCAACCAGGAGTAGTAACAACAAGGCGAGGTATAGGGAGTGCTTGAAGAACCACGCAGTGAGCATCGGCGGCCACGCGCTCGACGGCTGCGGCGAGTTTCTCCCCGCCGGAGCGGAGGACACGATGGACGCCCTCAAATGCGCTGCCTGTAACTGCCACCGCAATTTCCACCGCAAGGAAACGGACGCGATTGGTATTGGAGTCGGGGACGGGTTTCTGTTGACCAACCATCCTCACTTCCACCAGCAGCATCAACCGCCTCAGTTCTCGCCGTATTACCGGACGGCACCGGCGGGGTATTTGCACGTGGGAGGACAGCAGAGGCATCCGGCGACGCTGGCGCTGCCGTCAACTTCGGGAGCAGGCGGTGGGGTCCAGAACATAAGGGACGATCAAGAAGATGTTTCGAATCCTAGTGGAGGAGGAGGAGGAGGAGATGGGTCGAAGAAGAGGTTCAGGACGAAGTTCACAGCGGAGCAGAAGGACAAAATGCTGGGATTAGCTGAGAAACTGGGTTGGAGGATTCAGAAGCACGACGAGGCGGTGGTCCAACAGTTCTGTGACGAGACGGGAGTGAAGCGTCACGTTCTCAAGGTTTGGATGCATAACAACAAGCACACTCTTGGTAAGAAGCCCTAG 756 0.5714 MDFEEQEEELGMGPTGSYDSMGNPTRMKMAGGGEVMVVQATRSSNNKARYRECLKNHAVSIGGHALDGCGEFLPAGAEDTMDALKCAACNCHRNFHRKETDAIGIGVGDGFLLTNHPHFHQQHQPPQFSPYYRTAPAGYLHVGGQQRHPATLALPSTSGAGGGVQNIRDDQEDVSNPSGGGGGGDGSKKRFRTKFTAEQKDKMLGLAEKLGWRIQKHDEAVVQQFCDETGVKRHVLKVWMHNNKHTLGKKP 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g01155 251 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 50 99 IPR006456 -
Accr9g01155 251 FunFam Zinc-finger homeodomain protein 2 181 249 - -
Accr9g01155 251 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 42 247 - -
Accr9g01155 251 NCBIfam ZF-HD homeobox protein Cys/His-rich dimerization domain 49 99 IPR006456 -
Accr9g01155 251 NCBIfam homeobox domain, ZF-HD class 188 244 IPR006455 -
Accr9g01155 251 MobiDBLite consensus disorder prediction 156 173 - -
Accr9g01155 251 Pfam ZF-HD protein dimerisation region 48 100 IPR006456 -
Accr9g01155 251 MobiDBLite consensus disorder prediction 1 25 - -
Accr9g01155 251 MobiDBLite consensus disorder prediction 156 190 - -
Accr9g01155 251 SUPERFAMILY Homeodomain-like 174 249 IPR009057 -
Accr9g01155 251 Gene3D - 174 249 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr9g01155 Accr-Chr9 14389990 14390745 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr9g01155 1 247 ZF-HD Transcription Factor Family AT4G24660 49.600 6.90e-73 220
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Accr9g01155 ZF-HD_dimer 3e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr9g01155 - - qsa:O6P43_025228 347.051