Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g01133 ATGGCGGCTCTTCCCGGTTCTCTTCAGTTGTCCTGTGGATTGGGACCTTGGAGGAACCAGAATTACAATAAACAACCTTTGCTCCTGAAACAAGAATGCTGGAGACTTCGACTCTCTTGCAATATAAACAGGCCATTACATGCCTTATCTTGCAAATCTCAGTCTTTCAAGTGTTATTCTTTTCTAGTACCTGGCAGACCAAGTGAACTACCGATTGTTAAGGTGGCTGCCACAGCACTGACAAGGTCCTGCAATGTTTTACAAGGTAATCCTGTCATAGCAAAGTTAATTCCAGCACTTGGTGTAATCGCATTTGCTATATGGGGTGTTGGCCCATTACTATATATGACAAGAAAACTTTTCCTTCAGAGGGATAGCAATTGGAAGAAAAGCAACTCAAATTATATAGTAACTTCTTATCTTCGGCCAATAATGTTATGGATTGGAGCTATACTTATGTGCAGAGCTTTGGAGTCAGTAGTTCTACCTACAGAAACTAGCCAGATTGTTAAGGAAAGGCTTTTGAATTTTGTGAGATCATTGTCAACTGTACTTTCATTCGCATATTGTTTATCAAGTGTGATTAAACAAGCACAGACATTCTTTGTTCAGAGTGCTGATGCCAATGAGGCAAGAAATATGGGATTCCAATTTGCTGGCAATGCTCTGTACACTGCAGTATGGGTTACTGCCTTTTCATTGTTCATGGAACTGCTGGGTTTCTCTACCCAGAAATGGCTAACTGCAGGAGGTCTTGGGACAGTTTTACTAACTCTTGCTGGTCGTGAGATATTTACAAACTTCCTTTCCAGCTTGATGATTCACGCAACTAGACCTTTTGTGGCGAATGAATGGATTCAAACAAAGATTGAAGGATATGATGTTTCTGGTACTGTAGAGCGTGTTGGCTGGTGGTCTCCAACAATCATAAGAGGTGAAGATCGTGAGGCTCTTCATATTCCAAACCACAAATTTACAATGAATGTTGTGAGGAACCTTACTCAGAAAACACATTGGAGGATCAAAACCCACTTATGCATCAGTCATTTGGATGTCGGCAAGATTAATAATATTGTTGCCGACATGCGGAAAGTCTTGGCCAAAAATCCTCAAGTAGAGCAGCAGCGGCTGCACAGGAGAGTGTTTCTGGAGAATGTAGATCCTGAAAATCAATCTCTTATGATACTGGTGTCTTGTTTTGTCAAGACCTCACGTCATGAAGAGTATTTTCGTGTTAAGGAAGTTATACTATTAGATCTTCTCAGAGTCATTGGTCATCATGGGGCTCGACTTGCAACACCAGTTCGTACCGTGCAGAAGAGATTTAGTGATGATGACTTAGAGAACATGCCCTTCTCAGACTCTTATGTTGATGGTGCTAGAACAGTGCGCAACCGTCCATTATTATTGATTGAGCCATCTTACAAAATCAGCTCTGATGATAGAACAAGGAGCCAAAGAACACAAACCAAAAATTCTGCAAAGACTGATGCCAAGGCTGGATCAACAGTGGTTCCAGATTCTGATACTGGAGAAACTCCTTCAAACTCCAAGTCAGGTTCCAAAGCTGTGACGCCTAATTCTGATGTGAATGGAAAATCTGAAAATGCCGTGTCATCCATGGTTCACCCTGCAGCACGTGAAGATGATCCGCGGAAACCAGATTCAAATACTAATGGAAATATCAGGTTGCCAGATATCTCTGCTTCCAATTCCAAAGCAAATTTAAGCCAGGACTTGAACCTTAAGCAGAAAACTGACCCTGACAATATAATGTCATCCTCAGCTTCAAGTAATGCTGACATAGAACTGGTGGATCCTCTGGATAAACCACCGAAACAACAAGGCGAAAGGAAACCGGCCGAACAGGCTCCTACATGCAAGCCTGATGTTGAAGAGAATATAGTCCTTGGTGTTGCATTGGAGGGATCAAAGAGAACCCTTCCTATTGAGTGTTGA 1959 0.4196 MAALPGSLQLSCGLGPWRNQNYNKQPLLLKQECWRLRLSCNINRPLHALSCKSQSFKCYSFLVPGRPSELPIVKVAATALTRSCNVLQGNPVIAKLIPALGVIAFAIWGVGPLLYMTRKLFLQRDSNWKKSNSNYIVTSYLRPIMLWIGAILMCRALESVVLPTETSQIVKERLLNFVRSLSTVLSFAYCLSSVIKQAQTFFVQSADANEARNMGFQFAGNALYTAVWVTAFSLFMELLGFSTQKWLTAGGLGTVLLTLAGREIFTNFLSSLMIHATRPFVANEWIQTKIEGYDVSGTVERVGWWSPTIIRGEDREALHIPNHKFTMNVVRNLTQKTHWRIKTHLCISHLDVGKINNIVADMRKVLAKNPQVEQQRLHRRVFLENVDPENQSLMILVSCFVKTSRHEEYFRVKEVILLDLLRVIGHHGARLATPVRTVQKRFSDDDLENMPFSDSYVDGARTVRNRPLLLIEPSYKISSDDRTRSQRTQTKNSAKTDAKAGSTVVPDSDTGETPSNSKSGSKAVTPNSDVNGKSENAVSSMVHPAAREDDPRKPDSNTNGNIRLPDISASNSKANLSQDLNLKQKTDPDNIMSSSASSNADIELVDPLDKPPKQQGERKPAEQAPTCKPDVEENIVLGVALEGSKRTLPIEC 652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g01133 652 MobiDBLite consensus disorder prediction 557 601 - -
Accr9g01133 652 SUPERFAMILY Sm-like ribonucleoproteins 264 334 IPR010920 -
Accr9g01133 652 MobiDBLite consensus disorder prediction 506 538 - -
Accr9g01133 652 MobiDBLite consensus disorder prediction 477 629 - -
Accr9g01133 652 Pfam Mechanosensitive ion channel 221 430 IPR006685 GO:0016020|GO:0055085
Accr9g01133 652 Gene3D - 280 335 IPR023408 -
Accr9g01133 652 Gene3D - 178 278 - -
Accr9g01133 652 PANTHER OW CONDUCTANCE MECHANOSENSITIVE CHANNEL 24 651 IPR045042 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr9g01133 Accr-Chr9 13947854 13953811 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr9g01133 38 651 Mechanosensitive Ion Channel Family AT5G10490 56.748 0.0 678
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr9g01133 K22047 - gmx:100789444 826.624