Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g01125 ATGGAAGCTCCCACCACCCAAACAGAGAAGATATATGTTGCTGTGAGTAATGATCTTCAAGATGGAATCAAAACCTTGAATTGGGCTCTCCATAAATGGAAATCTCATCCTATTTCCTTTGTTATTCTCTTTGTCAATCACAATACTTCCAAGGATCATGTTCATACCCCATTTGGGAAACTCCCTGCAAAATCTGTGAACGATGAGATGTTACCAGCTTTCAGGCAACAAGAACAAGATAAAGTCGATAAACTTCTTTCCAAGTACATATCTTTCTGTGACAAGGTGCCAGCTGAAATACTTGAAGTCGAGAAATTGGATGAACCAATCCAAAACAGAATCGTGGACATGATTATTGGTCTAGAAATAACCAAACTTGTCATTGGCTTTTCAGTGATGAAACCCTCTTGGAAATCACGAGGTGCCATGAGTAGATTGTTCTATATTCATCAGCATAAGCCTGAATTCTGTGAACTGTTCATCTTGTGTGGAGGGAAACAAGTGTTCATGAGAGGATCGAACGATGAGAAGATCTTGGAGGACGACTATGGTGTAGTGGTAGCCAGAATAAGAGACAAGAAAACGTTTATGGATTGGTTGGAGAAAGTGTTTCCTGAGAGAAACAGCATAGATTCCCCAGATTCCAGAATCTCTCCTAGATCAGCAGCATCAACTTCATTGTCAGCAAGTATGGCATCTCCAGGTTCACTACAGAACCAGTGGGAAGTCCATCAGCAAGAGATTGAAACTTATTTTCAGGATTTGTGTTCTTCTAACATGAATTTTGATGAACAAATTGAACTTGAGGAACAAGACAGTGACGTCTCGCGGATTAGTGAAATTCAGCTAGATGATGTCAGGCAACAGAACTATTCGAAACTGAAAAGAAATGAGATTCTGAAAGGAAAATTGGAGGAGGCACGTAAGATGATCCAACTGAAGAGGAAAGAAGCAAAGGATCAAAGTGATAGGCATGCAAAAGCTGAATGGGCTATTTGTTTAAGCAACACTCGGGCTCAAGAACTTGAAGGCAAAATTAACGAAGAGATGAACATGAAGGAGGAGTTGGCAAAAGAATTGGAAGCAGAAAAAGAAACCATATATGAAACCAGACGTGATATTGAAGAAAGCAGAAAAAGGTTAAGCTCATTGTTGGAGCTTCAATTGGAGCTCTCAAACAAGCTTCAGATCTCTACACAAGCAAAATCACAAGCCGAAATCCGGCTGGAGAATGCGGCGTATCTCAGGTCGGCGATGTTGGCCGACATAGACCAGCTTAGGAGACAAAGAGACGTGCTTTACAGAAGGATCGAGTTCTGTAAAGATAAGGACGCCATAGGAATGGCGGCCAAGCTCACTGAACCCAGTTTAAGTTTCAGAGAGTACACTACGGACGAGATCAGATTGGCTACCGACAACTTCTCCGACCTCCTCAGGTTGAGGTCCGGTGGTGCTGACTGGACCAATGTTTACAGAGGAAAGATCAATCATTCCACTGTAGCCATCAAGATGCTCGCTTCCACTCATGACCGGTCCCCCCAAGACCTCCAAGCCAAGGTGAGACTTGTTGGCGGCATTCGACATCCTCATGTGGTTGCGCTGGTGGGCTTTTGCCCTGAGCTAAAATGCATAGTTCTGGAATACATGAATAATGGTAGCTTGAGGGACATGCTATTTTCCCGAAGAAGAAACCGGGCCTTACGATGGCAAGACCGAATCAGGATAGCTACTGAGGTTTGTTCGGGCCTGGGCTTTCTTCATTCAGCCCAGCCTAGGCCCTTCATTCATGGGCACCTAACTCCCTCTAGCATCCTCCTCGATCACAATCTTGTTGCGAAGATCAAAGTTTTCGGGTGGAAGGAAGGCAGCCCAGAATCTGACGTAAGGGCCTTTGGGGTTTTGATCATGCATCTCCTAACTGGAAGAAACTGGGGCGGCCTAGTTGAGGAGGAGACGATGATGGGAGGCTCTTTGCTGAGGGTTCTGGATGAGAGTGCTGGGTCGTGGCCGTTTAATGTGGCCCAAAATCTAGCGGACCTAGCCGTGAAGTGTATGGGCTTTCCCAATGGGCCCAAGCCCGAAGAAGGATTAAGCATTGGGAATGCAATGTTGGAACTACAAGAAATAAGAAGAGAGGCCAACGAGGAAGTTGCAAGAGGAGATTCATGTGGAGGTGTAGATAAAGAAGAGTTGATGGATGTGCCCAATGTATTTCTATGTCCCATACTTCAGGAGGTGATGAAGAACCCACACGTGGCAGGGGATGGGTTTTCATATGAATTAAAAGCAATAGAAGAATGGGTTGGTTCAGGGCATGAGAGCTCGCCAATGACCAATGCAAGGCTACCTCACTTGGTCTTTACACCAAATCACTCCCTTCGTTCCCTAATTCAGGATTGGCAAACTAAAACAACATCTCAAATTTCAAATTAG 2433 0.446 MEAPTTQTEKIYVAVSNDLQDGIKTLNWALHKWKSHPISFVILFVNHNTSKDHVHTPFGKLPAKSVNDEMLPAFRQQEQDKVDKLLSKYISFCDKVPAEILEVEKLDEPIQNRIVDMIIGLEITKLVIGFSVMKPSWKSRGAMSRLFYIHQHKPEFCELFILCGGKQVFMRGSNDEKILEDDYGVVVARIRDKKTFMDWLEKVFPERNSIDSPDSRISPRSAASTSLSASMASPGSLQNQWEVHQQEIETYFQDLCSSNMNFDEQIELEEQDSDVSRISEIQLDDVRQQNYSKLKRNEILKGKLEEARKMIQLKRKEAKDQSDRHAKAEWAICLSNTRAQELEGKINEEMNMKEELAKELEAEKETIYETRRDIEESRKRLSSLLELQLELSNKLQISTQAKSQAEIRLENAAYLRSAMLADIDQLRRQRDVLYRRIEFCKDKDAIGMAAKLTEPSLSFREYTTDEIRLATDNFSDLLRLRSGGADWTNVYRGKINHSTVAIKMLASTHDRSPQDLQAKVRLVGGIRHPHVVALVGFCPELKCIVLEYMNNGSLRDMLFSRRRNRALRWQDRIRIATEVCSGLGFLHSAQPRPFIHGHLTPSSILLDHNLVAKIKVFGWKEGSPESDVRAFGVLIMHLLTGRNWGGLVEEETMMGGSLLRVLDESAGSWPFNVAQNLADLAVKCMGFPNGPKPEEGLSIGNAMLELQEIRREANEEVARGDSCGGVDKEELMDVPNVFLCPILQEVMKNPHVAGDGFSYELKAIEEWVGSGHESSPMTNARLPHLVFTPNHSLRSLIQDWQTKTTSQISN 810
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g01125 810 CDD RING-Ubox_WDSUB1-like 735 790 - -
Accr9g01125 810 Pfam Protein tyrosine and serine/threonine kinase 486 618 IPR001245 GO:0004672|GO:0006468
Accr9g01125 810 PANTHER OS02G0152300 PROTEIN 11 799 - -
Accr9g01125 810 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 732 809 IPR013083 -
Accr9g01125 810 MobiDBLite consensus disorder prediction 211 233 - -
Accr9g01125 810 Coils Coil 423 443 - -
Accr9g01125 810 Coils Coil 297 324 - -
Accr9g01125 810 SMART Ubox_2 737 800 IPR003613 GO:0004842|GO:0016567
Accr9g01125 810 Pfam U-box domain 734 803 IPR003613 GO:0004842|GO:0016567
Accr9g01125 810 Gene3D Transferase(Phosphotransferase) domain 1 555 708 - -
Accr9g01125 810 SUPERFAMILY Protein kinase-like (PK-like) 455 685 IPR011009 -
Accr9g01125 810 ProSiteProfiles Protein kinase domain profile. 476 739 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr9g01125 810 SUPERFAMILY RING/U-box 728 803 - -
Accr9g01125 810 MobiDBLite consensus disorder prediction 210 233 - -
Accr9g01125 810 Coils Coil 339 380 - -
Accr9g01125 810 ProSiteProfiles U-box domain profile. 733 807 IPR003613 GO:0004842|GO:0016567
Accr9g01125 810 Gene3D Phosphorylase Kinase; domain 1 449 548 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr9g01125 Accr-Chr9 13868858 13874110 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr9g01125 6 810 U-box Gene Family AT5G65500 45.510 0.0 676
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Accr9g01125 PK_Tyr_Ser-Thr 2.7e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr9g01125 - - pcin:129299872 994.186