Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g01122 ATGGAAACATTAGAGAAGCACGGAGGAGAGCTTTCCGGCGAAGATGAGACGTCGCCGAGAGGTATACTGGAAATCCCTGTTTCAGGCACGGAATCTGACAACAGCGGAAGCAGTAGCAGTAGCAGAAACAGCAGCAGCTTCTTCAGCTCAAGCTCGCCGGAGAAGTCGTCGTTGTCGTCGGAGACAGAGAGAGTGAACGGGAGGGAATGGCAGGGACAGCCATGGAAGGCGATGATAGATTCATGGAGGAAGAAATCAGTGCAGAGAATATCGGCGATTTCATTACTTGCATCGAGCTATGAGATGTCGAAGAAAAGCTTGAGGAAGAGGAGGATTGAACGGATTCGTAGCGCAGAAGATCGAATTAATCGGGGAATTATACCTAAAAAGCTTTCATGGAGGAACTTCGATTACGCAGAGCTCCAAGCTGCAACAGATAATTTCAATCCTGAGAACCTGATTGGACAAGGAGGGCATGCTGAAGTCTACAAAGGACGCTTACTGGACGGTCAACTTGTGGCAGTGAAGAGGCTAATGAAGAAAGAGAAGGAAAATGAGGACAAAGCGGGTGATTACTTATCAGAGTTGGGCATTATTGCCCACATAAACCACCCAAATGCTGTGCGTTTGATTGGGTTTGGGGTCAACAATGGTCTCTACTTTGTCTTGCAATTAGCCCCACATGGCAGCCTTTCTTCTCTGCTCTTTGGTTCTGAATGCTTGGAGTGGAAGATAAGGTTCAAGGTAGCTGTTGGTGTGGCACAGGGATTGCGATACCTGCATCATGATTGCCAAAGACGAATCATTCACAGAGACATCAAGGCCTCCAACATATTACTAAATGAAAATTACGAAGCTGAGATTTCGGATTTTGGACTCGCGAAATGGCTCCCAGAGAAGTGGTCTCACCATGTTGTCTTCCCAATAGAAGGCACATTCGGGTATTTGGCTCCAGAGTATTTTATGCATGGAATTGTGGATGAGAAGACTGATGTATTCGCCTTTGGGGTTTTGCTGCTGGAACTCATCACTGGTCGTCGTGCAATTGATTCATGCAGCAAGCAAAGTCTTGTCCTCTGGGCAAAACCACGACTAGAAAGACACAATGTGAAGGAATTAGTAGACCCACGATTAGGAGAAACTTATGATTCCACTGAATTGAAGAGGACCATGCTTACTGCTTCCATGTGTCTCCACCACTCATCCCCCCACCGTCCATACATGAAAGAGGTCGTGCAGCTGCTGAAGGGTGAAGAGGGACTTGTTGATGCTAAGCAGAAATCAGTATCAACAAGATCCATCTTGTTAGATGCCTGTGATCTTGAAGAATATACCTGCTCTACTTACTTGAACGATCTCAACCGTCACAGGCAACTAGTCATGGAGTGA 1389 0.4651 METLEKHGGELSGEDETSPRGILEIPVSGTESDNSGSSSSSRNSSSFFSSSSPEKSSLSSETERVNGREWQGQPWKAMIDSWRKKSVQRISAISLLASSYEMSKKSLRKRRIERIRSAEDRINRGIIPKKLSWRNFDYAELQAATDNFNPENLIGQGGHAEVYKGRLLDGQLVAVKRLMKKEKENEDKAGDYLSELGIIAHINHPNAVRLIGFGVNNGLYFVLQLAPHGSLSSLLFGSECLEWKIRFKVAVGVAQGLRYLHHDCQRRIIHRDIKASNILLNENYEAEISDFGLAKWLPEKWSHHVVFPIEGTFGYLAPEYFMHGIVDEKTDVFAFGVLLLELITGRRAIDSCSKQSLVLWAKPRLERHNVKELVDPRLGETYDSTELKRTMLTASMCLHHSSPHRPYMKEVVQLLKGEEGLVDAKQKSVSTRSILLDACDLEEYTCSTYLNDLNRHRQLVME 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g01122 462 PANTHER OS08G0249100 PROTEIN 14 429 IPR046958 -
Accr9g01122 462 FunFam receptor-like cytosolic serine/threonine-protein kinase RBK2 227 429 - -
Accr9g01122 462 Gene3D Phosphorylase Kinase; domain 1 120 223 - -
Accr9g01122 462 MobiDBLite consensus disorder prediction 28 67 - -
Accr9g01122 462 SUPERFAMILY Protein kinase-like (PK-like) 130 415 IPR011009 -
Accr9g01122 462 SMART serkin_6 148 459 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr9g01122 462 FunFam Receptor-like cytosolic serine/threonine-protein kinase RBK1 125 225 - -
Accr9g01122 462 ProSitePatterns Protein kinases ATP-binding region signature. 154 176 IPR017441 GO:0005524
Accr9g01122 462 ProSiteProfiles Protein kinase domain profile. 148 421 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr9g01122 462 MobiDBLite consensus disorder prediction 1 70 - -
Accr9g01122 462 Gene3D Transferase(Phosphotransferase) domain 1 227 435 - -
Accr9g01122 462 Pfam Protein kinase domain 151 358 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr9g01122 462 ProSitePatterns Serine/Threonine protein kinases active-site signature. 268 280 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr9g01122 Accr-Chr9 13820442 13825378 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr9g01122 135 461 Trihelix Transcription Factor Family AT1G70460 39.466 7.82e-70 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Accr9g01122 Pkinase 7.1e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr9g01122 - - pcin:129295504 760.37