Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g01108 ATGGACACTCCAAACCAATCAGAGCCTACATTAGGACAAAAAGAGATGTTACCTCCACCTCCTGGAACTTTTCAAAATCGCGAAGACCTCATTAAATATGTTCGTGATTTTGGTGCCAATCATGGATATGTTGTGACCATTAAGAAGTCCAGAAAGGACAGAAGAGTCATCCTTGGCTGTGATAGAGGTGGTGTATATCGGAGTAGGCGCAAAACGGATGAAAGTAAGCGCAGAAGGAAAGCAACCTCACGCCTTATTAATTGTCCTTTTGAGGCCGTTGGTAGAAGGAGAGATGATGTGTGGGTACTTAGTGTAAAAAATGGGGATCACAATCATGAACCCTTGAAAGACATGTCAGAACATCCCTATAGTCGACGTTTCACTGAGGAAGAAATAAGACAAATCAAGATAATGACTGAAGCTGGTGTAAAACCTTGTCAAGTGCTTAAAACTCTTAAACAAAGCAATCCAGAACTGCAGTCAACTCCAAGGCATTTGTACAACCTCAAAGCAAAGATCCGTCAGGGAAATCTATCAGAGAACACTTTCAAGTCATGGAGGCCAAACAGCTCTTTTCCCGTTGAAACAAACAACACTCCATCTGGTGGTTCATCAATGCAAAACTACCGGCCGCTGAAGGTTCCTAATTTTATTGGGGGGAGATACATAGATTCACAAAGTTGTGGAATTCTTGATGTTACAAATCCTGCAACACAAGAAGTTGTGTCTCAAGTTCCTTTAACTACTTATGAAGAGTTCAAAACTGCAGTCAAAGCAGCGAAGCAAGCTTTTCCTTCATGGAAAAACACTCCAATCACCACTCGCCGGCATATTATGTTTAAGTTCCGAGAGCTTATCTGCAGGGACATTGATAAGCTTGCGATGAATATCACCATAGAGGAGGGTAAGACTTTAAAAGGTGCTAAAAGAGACGTGCTCCATGGTTTAGAGGTGGTAGAACATGTTTGTGGGATGGCATATCTGCAGATGGGGGAATTTGCCCCTAATGCTCGGGATGGAATTGATATATACTGCATAAGAGAACCCCTTGGAGTTTGTGCTGGAATATGCCCAGTCAACTTTCCAGCAATGATACCCTTGTGGATGTTCCCTATAGCAGTTGCATGTGGCAACACATTTATTCTCAAGCCATGTGAGAAGAATCCAGGGGCTTCAATGATACTTGCAGCACTAGCAATGGAAGCAGGTTTTCCAGATGGTGTATTGAACATTGTTCATGGTACCCATGAGATTGTTAATCAAATATGTGATGATGAGGATATAAAAGCTATATCATTTGCAGGGCCAACTGCAGCTGGAATCCACATATATGCTGGGGCTGCTGCTAGAGGGAAACGCGTCCAGTTCAATACAGGCAGCAAAAATCATGCAGTTGTCATGCCGGATGCTAGCATGGATGCTTCTCTAGATGCTCTTGTTGCTTCTTCCTTTGGTGAGGCAGCAGAGAGATGCATGACTCTAAGCACAGCTATTTTTGTTCGAGGATCATTGCCATGGGAAGAAGAACTTGTGCAGCGTGCCAAAGTACTTAAAGTGAATGCAGGAACAGACCCTAGTGCTGATCTTGGTCCAGTTATTAGCAAGGAGGCAAAGGATCAGATATGTAGATTAGTTCAGAGCAGTGTTGAAAATGGTGCAAGGCTACTGCTTGATGGAAGATGTGTTGTGGTACCAGGATATGAGAATGGGAACTTTGTTGCCCCTACAATTTTATGCGATGTTACAATCGACATGGAGTGCTACAAGGAAGAAATTTTTGGACCAGTTCTTCTCTGCGTGCAGGCTAATAACCTAGATGAGGCAATATCAATAATCAACAAAAACAAGTATGTAAACGGAGCTACCATATTTACCACATCTGGTATAGCTGCTAGGAAGTTTCAGGACGAGGTTGAGGCTGGTCTGATTGGAATCAATGTTACTGCTCCTGTTCCCTTGCCATTTTCTTCCTTCAGCGGGTCAAATGCATCTTTTGCTGGTAAGGAAGGAGTTCAGTTTTATACCCAAATCAAAACAGTGGCACAACAGCGGAAGGAGTTCCCAAGTCTTGGTGTTTTGCCTTCTGCAAGTCCAGCTGACATGGGTAGGACCGATCAACATGTCTCATCATCAGTGCCTCCACCAGACAGACACTCAGCTAGAGAAATCGTGTCACAAATCATGCCTGTAGAATCTGAGAGTAATTCACCAGCACAAGGGGTGCAAATTGCGATTCCAGACCTTTCTACCGAGATCACAACTGTCTCATCTGCTTCTCCATCAACTGATAAGGGTCTTGGAAGACCGGCCATGTCCCTGGTTCTGCCTTTGTCATCTGTGAGAGACATGGAAGATCAGGACATGTCACTGGTATTATCACCTGCATCTCAGAGAGACATGACGAGCCAGCAAGTGTCAGTAGCCACACCCCAGACATCAGAGAGGCTCTACTTTCCTAAATCACCACAATGGAATGAAGCTTCCTCTGCAACATCTCAAAGGAGGGAAAATATCTCATCCACTTCTGACAGGAGTCATGTGCCGTCATCTCTAAGAAATAATAATACAGCGGCAACATCTCAGAGACCTGATGCCAACGCCACCACGGCTTTGGAATCAGAGAGGCCATACATGCCCTTATCCCGTAAAGTTGATAGCATTGGTCCATCTCACCGGATAGATGCTTCTATGCCTTCTACTTCTGGAAGTGTTGTGTACGTCCTAGCAGCATCTCATTTAAACGAGAGCCTTGGCCAAACAATTGAAAGACCTGAACCCATGTTTACAACTTCTGAGAGGATATATATGCCTGCATTTTCTCACAGTACGGATATTGGCTTAGGTCCTACTTCAGAGAGGATGTACATCACTGCAACATCTCATAGAACTGAAAGAATTAGCGCTCCATCCCAGCTTGGCGATCCTATGGTACAAAATATGACGGCAAGTTCAGAGAGGTTAAATATACCAGCTTCATCCCAAAGTATGTACAATCGTGACTCGATACTTTCAATAGACGAATTTTCCAGCCAATCTCCAGCTCTGACTTTACCAACTTCTCAGGGGATTTAA 3072 0.4388 MDTPNQSEPTLGQKEMLPPPPGTFQNREDLIKYVRDFGANHGYVVTIKKSRKDRRVILGCDRGGVYRSRRKTDESKRRRKATSRLINCPFEAVGRRRDDVWVLSVKNGDHNHEPLKDMSEHPYSRRFTEEEIRQIKIMTEAGVKPCQVLKTLKQSNPELQSTPRHLYNLKAKIRQGNLSENTFKSWRPNSSFPVETNNTPSGGSSMQNYRPLKVPNFIGGRYIDSQSCGILDVTNPATQEVVSQVPLTTYEEFKTAVKAAKQAFPSWKNTPITTRRHIMFKFRELICRDIDKLAMNITIEEGKTLKGAKRDVLHGLEVVEHVCGMAYLQMGEFAPNARDGIDIYCIREPLGVCAGICPVNFPAMIPLWMFPIAVACGNTFILKPCEKNPGASMILAALAMEAGFPDGVLNIVHGTHEIVNQICDDEDIKAISFAGPTAAGIHIYAGAAARGKRVQFNTGSKNHAVVMPDASMDASLDALVASSFGEAAERCMTLSTAIFVRGSLPWEEELVQRAKVLKVNAGTDPSADLGPVISKEAKDQICRLVQSSVENGARLLLDGRCVVVPGYENGNFVAPTILCDVTIDMECYKEEIFGPVLLCVQANNLDEAISIINKNKYVNGATIFTTSGIAARKFQDEVEAGLIGINVTAPVPLPFSSFSGSNASFAGKEGVQFYTQIKTVAQQRKEFPSLGVLPSASPADMGRTDQHVSSSVPPPDRHSAREIVSQIMPVESESNSPAQGVQIAIPDLSTEITTVSSASPSTDKGLGRPAMSLVLPLSSVRDMEDQDMSLVLSPASQRDMTSQQVSVATPQTSERLYFPKSPQWNEASSATSQRRENISSTSDRSHVPSSLRNNNTAATSQRPDANATTALESERPYMPLSRKVDSIGPSHRIDASMPSTSGSVVYVLAASHLNESLGQTIERPEPMFTTSERIYMPAFSHSTDIGLGPTSERMYITATSHRTERISAPSQLGDPMVQNMTASSERLNIPASSQSMYNRDSILSIDEFSSQSPALTLPTSQGI 1023
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g01108 1023 MobiDBLite consensus disorder prediction 793 876 - -
Accr9g01108 1023 CDD ALDH_F6_MMSDH 214 683 IPR010061 GO:0004491
Accr9g01108 1023 MobiDBLite consensus disorder prediction 182 208 - -
Accr9g01108 1023 NCBIfam CoA-acylating methylmalonate-semialdehyde dehydrogenase 215 683 IPR010061 GO:0004491
Accr9g01108 1023 FunFam Methylmalonate-semialdehyde dehydrogenase [acylating] 218 465 - -
Accr9g01108 1023 MobiDBLite consensus disorder prediction 793 868 - -
Accr9g01108 1023 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 459 659 IPR016163 GO:0016620
Accr9g01108 1023 PANTHER MALONATE-SEMIALDEHYDE DEHYDROGENASE 53 871 IPR010061 GO:0004491
Accr9g01108 1023 MobiDBLite consensus disorder prediction 696 718 - -
Accr9g01108 1023 SUPERFAMILY ALDH-like 207 684 IPR016161 GO:0016491
Accr9g01108 1023 FunFam Methylmalonate-semialdehyde dehydrogenase (Acylating) 459 659 - -
Accr9g01108 1023 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 233 667 IPR016162 GO:0016491
Accr9g01108 1023 MobiDBLite consensus disorder prediction 1 25 - -
Accr9g01108 1023 Pfam Aldehyde dehydrogenase family 223 680 IPR015590 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr9g01108 Accr-Chr9 13505092 13513758 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr9g01108 205 685 Aldehyde Dehydrogenase Gene Family AT2G14170 68.399 0.0 693
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Accr9g01108 Aldedh 7.5e-122 CL0099
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr9g01108 K00140 - qsa:O6P43_025198 1389.4