Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g01105 ATGTCGGCTGCAGCAACGTCCAAAGATGAGAGCCAAGGCTCAGGCGGCCGGAAAAGCACCTCTTCGGGGGCGGCGGGGAGGCTGTTAGAGCAAGGGATAAAGTGCCCGAGATGTGACTCACCCAACACTAAATTCTGCTACTACAATAATTACAGCCTGACTCAGCCAAGGCATTTCTGCAAGACTTGTCGTAGATACTGGACAAAAGGTGGAGCCTTGCGTAACGTTCCGATTGGCGGCGGTTGCAGGAAGAACAAGAAACTGAAATCATCCTCCTCCTCGTCAAGGCTCTCAAATGATGGTGGTTTCTGCCCTTCTCTTGATTTTAACCTCGGTGGTGGAGCCGCCGGCTTCTCACCCTTCGCTAGGCTGAACGATCACCCTCCAGCTTTCAACCTCGAAGTAACAACCCCGAGTGCTTTCGATATCGGATTTAATTACCCACTAAACGGCGGTGTAATTCACGGCATGAGCTCATCAATGAACGTTCAGAGTAGCCTTGCTTCTCCGATTGAGTCTCTGAGCTCTATAAACCAAGACCTGCACTGGAAACTGCAGCAGCAGAGACTAGCGATGCTATTTGGAGGGGATAGTACTACTGCTACTGTTGCTGGTCTAAAAGATAACCGAGCCGCCATTTCAGCCGTTAATCTCGAGAACCAGAGTCGTCGTCATCATCAGAAATCATCATCAACACACCCTATTTTGTTTCAGAATCTTGAGATTTCTTCGAAGCCGGCAGAGATGATCTGTCCAGTAGTCGTTGGAAATTCGAGAAGAGATACACCCACAGAGCTGTTCTTCGGGAGCTCGTACGCTTCGGTGACCCCGACGCAAACTATGGCAGGCTGCGGCGGCGGTAATAATAATGGGAATGATAATGGAAGTAGTAGCTGGAATCTTCAAGGTTGGGGTGATGTGCAGCAGCAATACAGTGCTTTGCCCTAG 948 0.5 MSAAATSKDESQGSGGRKSTSSGAAGRLLEQGIKCPRCDSPNTKFCYYNNYSLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKNKKLKSSSSSSRLSNDGGFCPSLDFNLGGGAAGFSPFARLNDHPPAFNLEVTTPSAFDIGFNYPLNGGVIHGMSSSMNVQSSLASPIESLSSINQDLHWKLQQQRLAMLFGGDSTTATVAGLKDNRAAISAVNLENQSRRHHQKSSSTHPILFQNLEISSKPAEMICPVVVGNSRRDTPTELFFGSSYASVTPTQTMAGCGGGNNNGNDNGSSSWNLQGWGDVQQQYSALP 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g01105 315 MobiDBLite consensus disorder prediction 281 302 - -
Accr9g01105 315 ProSiteProfiles Zinc finger Dof-type profile. 33 87 IPR003851 GO:0003677|GO:0006355
Accr9g01105 315 Pfam Dof domain, zinc finger 32 87 IPR003851 GO:0003677|GO:0006355
Accr9g01105 315 ProSitePatterns Zinc finger Dof-type signature. 35 71 IPR003851 GO:0003677|GO:0006355
Accr9g01105 315 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 20 214 IPR045174 GO:0003700|GO:0006355
Accr9g01105 315 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr9g01105 Accr-Chr9 13485131 13486078 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr9g01105 30 315 C2C2-Dof Transcription Factor Family AT5G65590 37.538 2.59e-53 175
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Accr9g01105 zf-Dof 1.2e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr9g01105 - - pcin:129284602 430.254