Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g01093 ATGAAGAGAAGTAATTCCTTCATGTTGTGGTTTGGAATGACTGTGCAGCTTTGCTTCTTTCTTTTCATTGGTTTCTCTGAGGGTTCCACCTCAATTAGTGGCAGAAGAGCTTTACTGAAGAATAACCTCACTCAAGCGTCATCTTCTCCTGCTGTCAAGCTAGATCAAAATCATAACCAGGTTGTGATAGATAATGGAATCGTCCAAGTAACGTTGTCCAAACCAGAAGGCTACGTCCTTGCAATATCCTACAGTGGAATTGACAATGTACTCGAAGCTCAAAACCAAAATAATAATAGAGGGTATCTTGACGTTGCTTGGAGTACTCATGAAGGTTTTCAGCAGTACCATGATTCTTGGAAAATCGAGGGGACCAAGTTCTCAGTCGTAGAAATGACCGAAGATCAAGTGGAAGTTTCATTTTTAAGAGGATGGACACATTCCATGAACGGATATATCCCTATAAATATAGACATGAGGTATATAATGCGAAGAGGGAACTCGGGATATTACTCGTACGCAATATTTGAGCGGCCAGAAGGATTTCCAGCAGCGCAGGTTTTTCAGATCAGGCTGGTTTATAAGCTCCGACAAGACAAGTTCCACTATATGGCTATATCAAGGAAGAGGCAAAGAGTAATGCCAACAGCTGAGGATAGAAACAGTGGACAGACACTGGCTTATCCTGAAGCTAAGCTCTTGAACAATGCTAAGAATCCAAGAATTAGAGGAGAGGTGGATGATAAATATCAGTACTCGGCGGAGAACAAAGGCAACCGCGTTCATGGATGGATTAGCTTTGACTCTGAACCACACACGGGTTTCTGGGTAATAGCGCCAAGTAATGAGTTTCGTAATGCTGGGCCCCACAAGCAGGATCTCACTTCTCATGTTGGCCCCACCTCTCTTGCTATGTTTGTGAGCACTCACTACGCCGGAACAAGTGTGTCGATTAATTTTGAAGAAGGGGAGACTTACAAGAAGGTGTTTGGCCCTATTTTTGTCTATCTCAACTCTGCTCCTAGTCAGGATAATTTAGACTCGCTCTGGTCAGATGCTGTTCGACAGTCCAATGAGGAAGTCAGAAGCTGGCCCTATGATTTCCCTCGATCTCCAGATTTCATTCTACCCCATGAACGAGGAACAGTAAAAGGACAATTACGAGTCCGAGATTGGTTCAAGAAGGGATGGGGAATCATAAATGCTAAGTTTGCTTATGTTGGTTTAGCTCTGCCTGGAGAAAATGGATCATGGCAGAGAGAAAGCAAGGGTTATCAATTCTGGACTCAAGCTGATGAGAATGGCTACTTTGAAATCAAATATGTTATACCAGGAGACTATAATTTCTACGCCTGGGTTCCTGGCTTTATTGGTGATTACAGATATAATGCTACAATTACCATCAAACCAGGCGGCGTCATTAAATTGGGTTCACTTGTATATAGTCCTCCAAGGAATGGTCCTACCATATGGGAAATTGGTGTCCCAGATCGCTCAGCCGGAGAGTTGTACATACCAGACCCTGACCCCAAGCTCGTGAACAGATTGTACCAGAACGATCCAAGAAACGGGTTTAGACAATATGGGTTGTGGGAACGTTACACTGACTTATATCCAGAGAAAGATCTAGTTTATAATGTTGGCATCCATAAGCATGACAAGAATTGGTTTTTTGCTCATGTTGCCAGAAGGACAGGAAATCAAACATACCAACCAACAACATGGCAGATTAAATTTGAAGTTAAAGATGACACATCAGGAAACTACACGCTTCAAGTGGCCATAGCATCAGCAAATGACGCCAAGTTGCAGGTTTGGTTCAATGATCCGAGAGACGTTGATCCGCACTTTGAGACAGCAAGAATGGGAAAAGACAATGCAATAGCGAGGCACGGCATTCATGGATTGTATAGTTTGATCAGTGTTGAGGTACCAAGTGATCGATTTAAAAAGGGAAACAATATTATCTATTTGAAGCAGTCAGAAGCCTCAGGCTCATTCCAAGGTGTTTTGTATGATTATCTCCGTTTAGAAAGACCTCCAATTACTGGAAGGATGTGA 2061 0.4275 MKRSNSFMLWFGMTVQLCFFLFIGFSEGSTSISGRRALLKNNLTQASSSPAVKLDQNHNQVVIDNGIVQVTLSKPEGYVLAISYSGIDNVLEAQNQNNNRGYLDVAWSTHEGFQQYHDSWKIEGTKFSVVEMTEDQVEVSFLRGWTHSMNGYIPINIDMRYIMRRGNSGYYSYAIFERPEGFPAAQVFQIRLVYKLRQDKFHYMAISRKRQRVMPTAEDRNSGQTLAYPEAKLLNNAKNPRIRGEVDDKYQYSAENKGNRVHGWISFDSEPHTGFWVIAPSNEFRNAGPHKQDLTSHVGPTSLAMFVSTHYAGTSVSINFEEGETYKKVFGPIFVYLNSAPSQDNLDSLWSDAVRQSNEEVRSWPYDFPRSPDFILPHERGTVKGQLRVRDWFKKGWGIINAKFAYVGLALPGENGSWQRESKGYQFWTQADENGYFEIKYVIPGDYNFYAWVPGFIGDYRYNATITIKPGGVIKLGSLVYSPPRNGPTIWEIGVPDRSAGELYIPDPDPKLVNRLYQNDPRNGFRQYGLWERYTDLYPEKDLVYNVGIHKHDKNWFFAHVARRTGNQTYQPTTWQIKFEVKDDTSGNYTLQVAIASANDAKLQVWFNDPRDVDPHFETARMGKDNAIARHGIHGLYSLISVEVPSDRFKKGNNIIYLKQSEASGSFQGVLYDYLRLERPPITGRM 686
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g01093 686 SUPERFAMILY Starch-binding domain-like 376 477 IPR013784 GO:0030246
Accr9g01093 686 Gene3D - 51 355 IPR014718 GO:0030246
Accr9g01093 686 SUPERFAMILY Galactose mutarotase-like 55 342 IPR011013 GO:0003824|GO:0005975|GO:0030246
Accr9g01093 686 Gene3D - 486 678 - -
Accr9g01093 686 Gene3D - 377 476 - -
Accr9g01093 686 CDD RGL4_N 59 346 - -
Accr9g01093 686 Pfam Polysaccharide lyase family 4, domain II 404 475 IPR029413 -
Accr9g01093 686 Pfam Rhamnogalacturonate lyase family 44 246 IPR010325 -
Accr9g01093 686 CDD RGL4_M 379 479 IPR029413 -
Accr9g01093 686 PANTHER RHAMNOGALACTURONATE LYASE FAMILY PROTEIN 55 681 - -
Accr9g01093 686 Pfam Polysaccharide lyase family 4, domain III 489 677 IPR029411 -
Accr9g01093 686 CDD RGL4_C 491 678 - -
Accr9g01093 686 SUPERFAMILY Galactose-binding domain-like 486 678 IPR008979 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr9g01093 Accr-Chr9 13253324 13261666 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr9g01093 48 681 Polysaccharide Lyase AT1G09910 53.918 0.0 689
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr9g01093 K18195 - gmx:100776664 879.011