Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g01073 ATGAATCGTCACCAACCCAATAATATTCCCGTCCGTCGTGATCATCATCAGCAGCATCAGCATCAAGAAACTGTGATTGACTTGAAGAAGTCGGTGAACTTCACCGGTGGGCTTGAGTTTTCAGGCCTGACCTACACAGTGACCAAGGAGAAGAAGGTTGATAATGGAAAGGTGAAGGAGAAAGTTGACTTGCTTCATAACATTACTGGCTATGCACCAAAGGGTTGTGTCACCGCCGTGATGGGTCCCAGTGGCGCCGGCAAGTCCACCTTCTTGGATGGTCTCGCCGGCAGAATTGCCAGTGGCAGCCTCAAGGGAAGGGTCTGCTTGGATGGCACTGATACTAACCCTACTTTGATCAAAAGAACCTCTGCCTACATCATGCAAGACGATAGGCTCTTCCCTATGCTCACTGTCTACGAAACTTTCATGTTCGCCGCTGATTTTCGGCTCGGTTCTCTTCCTCCTACTGAAAAGAAGCAGAGAGTAGAGAAGCTCATTGAGCAGCTTGGCCTATCATCAACACGGAACACATACATAGGAGATGAAGGCAAAAGAGGAGTATCCGGAGGAGAGAGGCGACGAGTGTCGATCGGCGTCGACATCATCCACGGACCACCGCTTCTATTTCTGGACGAGCCGACTTCTGGTCTGGACTCAACCAGCGCACACAGCGTGATCGAGAAGGTTCACGACATCGCACGCGGCGGAAGCACCGTGATCCTCACCATCCACCAGCCTTCATCAAGAATTCAGCTCCTTCTCGACCACCTGATCATCCTCGCCAGAGGGCAACTCATGTTTCAGGGCTCTCCCAAAGACGTTTCTCTCCATCTGGGTCGCTTGGGACGTAAAGTTCCCAAAGGAGAGAATCCGATAGAGAACCTCATTGATGTGATTCAAGAATATGATCTGTGTGATGTTGGTGTCGGAGCTCTTGCTGAGTTTGCCCGAACCGGAGTGAAACCCCTTCCTTTGCCTGACCAGGAACCCTCCCTCTCCACCGTCGTACCGTCAACCCCAGGCCCAAACCATCGCCTCGGAGATCGTTCCGCCGTAGATGATTTCGATCACAGTCTGAGAAGTATGAGAAGCCCGCTTACACCCCATAGTGGATTGCTTCAGATGTTAACACCTTCCCGCTTTAACAATGAACGTAAACTTCAGAATACTCCTATAAGTAATGCTTCGGCGGGGTATTACACGTACTCGAGCGAGATCCTGCCGGCGACACCGACGCCTCATAGCAGCGACTACACTGTGAATGAGAATGACTACATGACGCCGCCGGACGGGGTTATGCCAAAGCATGTGGGTCCGAAATTCGCAAACTCGTTCTTGACGGAGACGTGGATCCTGATGAGGCGGAACTTCTTAAACATCCGGCGAACCCCTGAGCTTTTCCTCTCAAGACTAATGGTGCTAACGGTGATGGGCTTCATGATGGCCACCATGTTCGTGAACCCAAAACAAGACGTTCAAGGAATCACCAACCGCCTCAGCTTCTTCATCTTCACCGTCTGTCTCTTCTTCTTCTCCTCCAACGACGCCGTTCCGGCCTTCATCCAAGAACGATTCATCTTCATCAGAGAAACCTCCCACAACGCCTACCGAGCCTCGTCGTACACCATCGCCGGAATAATCACTCACACCCCTTTTCTTTTGGTTCAAGCTTTCGCCTACGCCATAATTGTCTGGTTTGCTTTGAAGCTTGACGGTCCATTTCTCTACTTCCTTCTGGTTCTCTTTGTCTCTCTTCTCACCACCAACTCGTTCGTGGTTTTCGTGAGCTCGGTGGTTCCGAACTATATTCTCGGTTACGCCGCCGTGATCGCCTTCACAGCTTTGTTCTTCTTGTTCTGTGGTTACTTCTTGAGCAGCCACGATATTCCGATTTATTGGCGATGGATGAACAAAGTTTCGACCATGACGTATCCTTATGAGGGGCTTTTGATCAACCAGTATCGAAATTCACATGTGTTTGGGCAAAATCTGGTGGACGGGACAGATATTACAGGTCTCGATATCTTGAAGAGTCTTCATATAAGTACTGGTTGGTTTAGGAAGTGGGAAAATGTGATTATAATGTTGTTATGGGCTGTCCTGTATAGGACTTTGTTTTACTTGGTCCTTCGTTTTGCCTCCAAAAACCAGAGGTCGTAG 2163 0.4975 MNRHQPNNIPVRRDHHQQHQHQETVIDLKKSVNFTGGLEFSGLTYTVTKEKKVDNGKVKEKVDLLHNITGYAPKGCVTAVMGPSGAGKSTFLDGLAGRIASGSLKGRVCLDGTDTNPTLIKRTSAYIMQDDRLFPMLTVYETFMFAADFRLGSLPPTEKKQRVEKLIEQLGLSSTRNTYIGDEGKRGVSGGERRRVSIGVDIIHGPPLLFLDEPTSGLDSTSAHSVIEKVHDIARGGSTVILTIHQPSSRIQLLLDHLIILARGQLMFQGSPKDVSLHLGRLGRKVPKGENPIENLIDVIQEYDLCDVGVGALAEFARTGVKPLPLPDQEPSLSTVVPSTPGPNHRLGDRSAVDDFDHSLRSMRSPLTPHSGLLQMLTPSRFNNERKLQNTPISNASAGYYTYSSEILPATPTPHSSDYTVNENDYMTPPDGVMPKHVGPKFANSFLTETWILMRRNFLNIRRTPELFLSRLMVLTVMGFMMATMFVNPKQDVQGITNRLSFFIFTVCLFFFSSNDAVPAFIQERFIFIRETSHNAYRASSYTIAGIITHTPFLLVQAFAYAIIVWFALKLDGPFLYFLLVLFVSLLTTNSFVVFVSSVVPNYILGYAAVIAFTALFFLFCGYFLSSHDIPIYWRWMNKVSTMTYPYEGLLINQYRNSHVFGQNLVDGTDITGLDILKSLHISTGWFRKWENVIIMLLWAVLYRTLFYLVLRFASKNQRS 720
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g01073 720 CDD ABCG_EPDR 38 270 - -
Accr9g01073 720 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 38 288 IPR003439 GO:0005524
Accr9g01073 720 MobiDBLite consensus disorder prediction 1 20 - -
Accr9g01073 720 ProSitePatterns ABC transporters family signature. 188 202 IPR017871 GO:0005524|GO:0016887
Accr9g01073 720 SMART AAA_5 74 272 IPR003593 GO:0016887
Accr9g01073 720 Pfam ABC transporter 65 216 IPR003439 GO:0005524
Accr9g01073 720 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 60 276 IPR027417 -
Accr9g01073 720 Gene3D - 38 281 IPR027417 -
Accr9g01073 720 Pfam ABC-2 type transporter 449 655 IPR013525 GO:0016020|GO:0140359
Accr9g01073 720 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 20 708 - -
Accr9g01073 720 FunFam ABC transporter G family member 6 48 286 - -
Accr9g01073 720 MobiDBLite consensus disorder prediction 327 350 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr9g01073 Accr-Chr9 12825058 12827809 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr9g01073 25 302 Calmodulin-binding Proteins AT2G36910 26.056 9.56e-11 63.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr9g01073 K05681 - egr:104416937 1019.22