Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g01069 ATGGAGCTGACTCAACTCAGTTTTCTGGAAGAACTACTAGCTCCAAGAAGAGACACTTGGAGCACTTTTCCCTCTGGTTTGGAAGAGATATTCCCCTACAATGATTGGAGTTTTGATTCTTTTGTTGAGAACCCACCTTTAGCTCCTTTGAATCCTCCATTACCTTCATTTTCCACTCCACTAGACCCTAGATTTGAGGGTCCATACACTAATGAAGCAGAAGCAGCATATCCATTTGTTGATGGCTTCACTTTAACAGAGCTTCACTCTTCATATACCAGGAATGAAGATTCTGCACTATTTCCTGCACAGGAAAGTAACCCATCAATGGAGGATGAAGAGTTTGGCTTTCTGGGGGTAAGTGAAAATCAGAGCCTTGAAAGCATGAACACTACTGTCTGCAAAATTGAGGAACAGGTCACAGAAGTTCCAGTCTTTAACATGGGTTTGTGTGGGGAGAAGAAACCCAAGTCCAAGAAGCTTGAAGGTCAGCCCTCTAAGAATCTAATGGCTGAAAGGAGGAGAAGAAAGCGCCTCAATGACCGCCTCTCCATGCTAAGGTCTATAGTTCCTAAGATCAGCAAGATGGACAGAACCTCTATTCTTGGGGATACCATAGATTATATGAAAGAGCTTCTAGAAAGGATCGGTAAGCTGCAAGAAGAAAGAACGGAAGAGACTGCAAATCAGATAAATTTCCTGGGTAAATCCAAAGAGATGAAGCCAAATGAAGTGATGGTAAGAAATTCACCCAAGTTTGAGGTAGAGAAGGGAGACCAGGACACAAAAGTCAGTATCTGTTGTGGCACAAGGGCTGGATTGTTGCTATCAACAGTGAACACACTTGAAGCATTAGGACTTGAGATTCAACAATGCGTTATAAGCAGCTTCAATGATTTTTCAATGCAAGCATCTTGCTCAGAGGTATCTGAGCAGAGAACTGGCTTTAGCTCTGAAGAGATAAAGCAAGCACTATTCAGAAATGCCGGTTATGGTGGGAGATGTCTATAA 1011 0.4253 MELTQLSFLEELLAPRRDTWSTFPSGLEEIFPYNDWSFDSFVENPPLAPLNPPLPSFSTPLDPRFEGPYTNEAEAAYPFVDGFTLTELHSSYTRNEDSALFPAQESNPSMEDEEFGFLGVSENQSLESMNTTVCKIEEQVTEVPVFNMGLCGEKKPKSKKLEGQPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTSILGDTIDYMKELLERIGKLQEERTEETANQINFLGKSKEMKPNEVMVRNSPKFEVEKGDQDTKVSICCGTRAGLLLSTVNTLEALGLEIQQCVISSFNDFSMQASCSEVSEQRTGFSSEEIKQALFRNAGYGGRCL 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g01069 336 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 163 212 IPR011598 GO:0046983
Accr9g01069 336 SMART finulus 169 218 IPR011598 GO:0046983
Accr9g01069 336 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 97 330 - -
Accr9g01069 336 Pfam Helix-loop-helix DNA-binding domain 169 212 IPR011598 GO:0046983
Accr9g01069 336 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 166 226 IPR036638 GO:0046983
Accr9g01069 336 Coils Coil 209 229 - -
Accr9g01069 336 Gene3D - 152 213 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr9g01069 Accr-Chr9 12758242 12759545 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr9g01069 31 336 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G10570 47.112 6.44e-75 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Accr9g01069 HLH 7.1e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr9g01069 - - gmx:100806571 494.582