Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g01054 ATGGCATCATTTCTTTTCGACCTAAGCTCGATCGTCCGAGTAAATATAAGATTTTCTTCAAGATTGGAGCTATATTTTTTGCAGATGGATGTAGCTAAGGACCTTGCTGCTGGCACAGTTGGAGGTATAGCACAATTAGTATGTGGACACCCTTTTGACACCATCAAGGTTAAGCTTCAAAGCCAGCCCACACCACTTCCTGGCCAGCTTCCCAAGTATTCTGGTGCCATTGATGCTGTCAAGAAGACATTAGCTGCTGAAGGTCCCAGAGGGTTATACAAAGGTATGGGCGCACCACTCGCCACAGTAGCAGCATTTAACGCTGTCCTGTTCTCGGCCAGGGGACAAATGGAGGCCTTATTGAGGTCCCATCCCGGTGCCCCACTTACCGTCAAACAGCAGGTTGTTTGTGGTGCTGGTGCTGGAGTTGTGGTTTCCATTCTAGCTTGCCCCACTGAACTCATAAAATGCAGGTTGCAAGCACAGAGTGTCCTTGCAGGTTCTGGAAAATCTGCTGTGGCTGTTAACTATGGAGGACCCATGGATGTGGCCAGGCAAGTCTTAAGATCCGAAGGCGGGGTGAGAGGTCTATTCAAGGGCATGGTCCCAACGATGGCCCGAGAAGTACCTGGAAACGCGGTCATGTTTGGCGTTTATGAAGCAACAAAGCAGTTGCTAGCAGGAGGTTCTGATACATCCGGGCTAAGTAGAGGCTCATTGATTGTTTCTGGAGGCTTGGCTGGGGCTTCAGTGTGGTTAGCGGTTTACCCAACCGATGTGGTTAAGAGTGTGATTCAAGTGGATGATTACAGAAACCCAAAGTTTTCTGGTTCCGTTGATGCTTTCAGGAAGATTTTGGCTTCAGAAGGGTTAAAAGGTCTGTACAAAGGCTTTGGTCCTGCCATCGCTCGTAGTGTTCCTGCAAATGCAGCTTGCTTCTTGGCTTATGAGATGACTAGATCAGCCCTGGGTTGA 975 0.4882 MASFLFDLSSIVRVNIRFSSRLELYFLQMDVAKDLAAGTVGGIAQLVCGHPFDTIKVKLQSQPTPLPGQLPKYSGAIDAVKKTLAAEGPRGLYKGMGAPLATVAAFNAVLFSARGQMEALLRSHPGAPLTVKQQVVCGAGAGVVVSILACPTELIKCRLQAQSVLAGSGKSAVAVNYGGPMDVARQVLRSEGGVRGLFKGMVPTMAREVPGNAVMFGVYEATKQLLAGGSDTSGLSRGSLIVSGGLAGASVWLAVYPTDVVKSVIQVDDYRNPKFSGSVDAFRKILASEGLKGLYKGFGPAIARSVPANAACFLAYEMTRSALG 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g01054 324 ProSiteProfiles Solute carrier (Solcar) repeat profile. 32 120 IPR018108 -
Accr9g01054 324 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 30 323 - -
Accr9g01054 324 FunFam mitochondrial carnitine/acylcarnitine carrier-like protein 29 323 - -
Accr9g01054 324 ProSiteProfiles Solute carrier (Solcar) repeat profile. 129 225 IPR018108 -
Accr9g01054 324 Pfam Mitochondrial carrier protein 130 227 IPR018108 -
Accr9g01054 324 Pfam Mitochondrial carrier protein 241 323 IPR018108 -
Accr9g01054 324 Pfam Mitochondrial carrier protein 30 122 IPR018108 -
Accr9g01054 324 PRINTS Mitochondrial carrier protein signature 147 161 IPR002067 GO:0055085
Accr9g01054 324 PRINTS Mitochondrial carrier protein signature 200 220 IPR002067 GO:0055085
Accr9g01054 324 PRINTS Mitochondrial carrier protein signature 250 268 IPR002067 GO:0055085
Accr9g01054 324 PRINTS Mitochondrial carrier protein signature 295 313 IPR002067 GO:0055085
Accr9g01054 324 Gene3D Mitochondrial carrier domain 26 323 IPR023395 -
Accr9g01054 324 ProSiteProfiles Solute carrier (Solcar) repeat profile. 235 322 IPR018108 -
Accr9g01054 324 SUPERFAMILY Mitochondrial carrier 29 317 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr9g01054 Accr-Chr9 12558733 12560609 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr9g01054 49 318 Antiporters AT1G79900 34.657 8.09e-44 150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr9g01054 K15109 - gmx:100787332 509.605
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr9g01054 9 12558733 12560609 Accr9g01054 9 12558733 12560609 ECH