Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g01050 ATGACAGACTATAGGTCGCCGCCGACGATGAATCTTTGGACCGATGATAACACTTCCGTTATGGACGCTTTCCTGAGCTCCGATCTATCTGTGCTCTGGCCTAATCCGCCTCAGCCCCAATCCTCTGCTTCCACTACTACTCCTGGACCCGACCCGACCAAGCCTCTCTCTCACTCTCAGTCTTCCGCTGCTCTCTTCAATCAAGAAACCCTGCAGCAGCGTCTTCAGGCCTTGATTGAAGGTGCCAGAGAGAGCTGGACCTACGCTATCTTTTGGCAAGCGTCGTACGACTACTCCGGCGCGTCTTTGCTCGGCTGGGGTGATGGTTACTACAAAGGGGAGGAAGATAAAGGGAAGGGGAAGGCCAAAACGATGTCTTCCGTGGCGGATCAGGAGCACCGGAAGAAGGTTCTACGCGAGCTTAATTCCCTCATTTCTGGATCCTCGGCCCCCAACGATGATGCCGTGGATGAGGAAGTCACCGATACGGAGTGGTTCTTCCTCGTTTCCATGACTCAATCGTTTGTCAACGGTGACGGGTTGCCGGGTCAGGCTTTCTACAATTCCACACCGGTTTGGATCACCGGTGGGGAGAGATTGACTGCTTCGACTTGTGAAAGAGCGAGACAGGGCCAGGTGTTCGGACTTCAGACTTTGGTTTGTATACCGTCGGCAAACGGAGTGGTGGAGCTAGGATCCACTGAATTGATTTTCCAGAACTCGGATCTGATGACCAAGGTGAAAGTATGGTTCAATTTCAACAATCCAGATATTGGTTCATGGCCTCTCATGACTCCTAACGCCGATCAAGGTGAGAACGACCCTTCCTCGCTTTGGCTTAACGATCCGTCTTCTGGAATTGAAATCCGAGATTCGACCAACAACACTGTTCCGGCTTCGGTTCCGAGCTCAAATAATAGTCACAACATCCAGACAGTCGCTAAGCCTATGCAGTTTGAAACCCCAGTTTCGAGTACTTTAACTGAAGCACCAAGTGTTGTTCATGTCCCGAATACTCAATATAATAACCAGCAACGGCAACAGTCACATCAATCGAATAACCAGGGGTTCTTCTCAAAGGAGTTGAACTTTTCGGAATATGTATTCGATGGAAACAGCCTAAAGAACGGGAATATGCATTCCTTGAAGCCCGAATCAGGTGAAATTTTAAACTTCGGGGAGAGCAAGAGGAACTCTTATGCTGGAAATGGCAATTTCTTTACCGGACAGAGTCCATTCGTTGCAGAAGACAACAAAAAAAGAAGGTCGCCTACTTCCAAGGGTAGTAACGATGAAGGGATGCTCTCGTTTACTTCTGGTGTGAATTTGCCGGCTTCTAATCTGACTGGCGGCGGCGATTCCGATCACTCAGATCTTGAAGCGTCAGTGGTGAAGGAAGCGGATAGTAGCAGAGTGGTAGAGCTAGAGAAACGTCCTCGCAAAAGAGGACGAAAGCCTGCGAATGGCAGGGAGGAGCCTCTGAACCACGTTGAAGCAGAGAGGCAGAGAAGAGAGAAACTGAATCAGAGGTTCTACGCACTTCGTGCCGTGGTCCCAAACGTGTCAAAAATGGACAAGGCATCCCTGCTAGGTGACGCCATATCTTACATCAACGAGCTCAAATCTAAGCTCCAGACTCTTGAATTAAACAATAATGATTTACATAAGCAGCTGGATTCAGTCAAGAAGGAACTGGAGGTGGCCACTAGTAAAGATTCTCGGGCGCCGCCTCCACCAGATAAGGAACAAAAGACCCCTAACAACAACCAAGTAAATGGCAAGCTAATAGATTTAGACATCGATGTGAAGATCATAGGTTGGGATGCAATGATTCGAATCCAATGTAGCAAGAGGAATCATCCAGCAGCAAGGTTGATGGCTGCTTTACAGGAGCTAGACCTGGAAGTGAACCACGCAAGTGTGTCAGTAGTAAATGATCTGATGATCCAACAAGCAACAGTAAAGATGGGAAGTCGATTTTACACGCAGGAGCAGCTCCGGCTAGCTCTTACATCCCAGGTTGGAGATGTCCGATGA 2037 0.488 MTDYRSPPTMNLWTDDNTSVMDAFLSSDLSVLWPNPPQPQSSASTTTPGPDPTKPLSHSQSSAALFNQETLQQRLQALIEGARESWTYAIFWQASYDYSGASLLGWGDGYYKGEEDKGKGKAKTMSSVADQEHRKKVLRELNSLISGSSAPNDDAVDEEVTDTEWFFLVSMTQSFVNGDGLPGQAFYNSTPVWITGGERLTASTCERARQGQVFGLQTLVCIPSANGVVELGSTELIFQNSDLMTKVKVWFNFNNPDIGSWPLMTPNADQGENDPSSLWLNDPSSGIEIRDSTNNTVPASVPSSNNSHNIQTVAKPMQFETPVSSTLTEAPSVVHVPNTQYNNQQRQQSHQSNNQGFFSKELNFSEYVFDGNSLKNGNMHSLKPESGEILNFGESKRNSYAGNGNFFTGQSPFVAEDNKKRRSPTSKGSNDEGMLSFTSGVNLPASNLTGGGDSDHSDLEASVVKEADSSRVVELEKRPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYINELKSKLQTLELNNNDLHKQLDSVKKELEVATSKDSRAPPPPDKEQKTPNNNQVNGKLIDLDIDVKIIGWDAMIRIQCSKRNHPAARLMAALQELDLEVNHASVSVVNDLMIQQATVKMGSRFYTQEQLRLALTSQVGDVR 678
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g01050 678 CDD bHLH_AtAIB_like 488 564 - -
Accr9g01050 678 MobiDBLite consensus disorder prediction 31 61 - -
Accr9g01050 678 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 494 560 IPR036638 GO:0046983
Accr9g01050 678 MobiDBLite consensus disorder prediction 458 501 - -
Accr9g01050 678 Pfam Helix-loop-helix DNA-binding domain 495 540 IPR011598 GO:0046983
Accr9g01050 678 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 71 251 IPR025610 -
Accr9g01050 678 MobiDBLite consensus disorder prediction 563 579 - -
Accr9g01050 678 Gene3D - 483 570 IPR036638 GO:0046983
Accr9g01050 678 SMART finulus 497 546 IPR011598 GO:0046983
Accr9g01050 678 MobiDBLite consensus disorder prediction 563 592 - -
Accr9g01050 678 Coils Coil 537 571 - -
Accr9g01050 678 PANTHER MYC 60 672 IPR045084 GO:0003700|GO:0006355
Accr9g01050 678 MobiDBLite consensus disorder prediction 401 501 - -
Accr9g01050 678 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 491 540 IPR011598 GO:0046983
Accr9g01050 678 FunFam Transcription factor bHLH13 484 558 - -
Accr9g01050 678 MobiDBLite consensus disorder prediction 428 453 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr9g01050 Accr-Chr9 12509101 12511137 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr9g01050 1 675 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G32640 55.539 0.0 650
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Accr9g01050 bHLH-MYC_N 6.5e-56 CL0161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr9g01050 K13422 - qsa:O6P43_025161 921.768
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr9g01050 9 12509101 12511137 Accr9g01050 9 12509101 12511137 ECH