Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g01037 ATGGCTCTGCTAGAGACTCTTTCGTCTAATGAGCTTTACAACTTCATCATCCATGATACTATCTCTGCAACCCCATTTAGCAGCCATTGTGATTCCTCCCCTGATGCTAATGTCTTGTTGGAAAACAGAGGAATGAATCCCCAGGAACATGACCCTGCATCATCGTTTGGTAATGTTCTCTCTCGTTCAAGGAAACGCCATTCTGATGAGCTTGAGGTTCCTGAGGTTGCGCAAGGAAGGAAGAAGAGGAGAAGGAAGCCAAGAGTTTGTAAGAACAAAGAAGAAGCTGAGACTCAGAGAATGACTCACATTGCTGTCGAAAGAAACCGCCGGAAGCAGATGAATGAGCACCTCGCCGTCCTCCGTTCACTCATGCCTGAATCCTACGTCCAAAGGGGTGACCAGGCCTCTATTGTGGGTGGTGCTATAGAATTTGTTAAGGAGCTTGAGCATTTGTTGCAGTCACTTGAAGCTAAGAAGTTGCAGATTCTGCAACAAGTAGTAGTAGCACAAACTAATAATGAAGACTCTTCTTCTTCATCTTCTTCTTGTTCTGCTTCTTCCATTTTCAAACTCATGAGTCCTCCATTTTCACAATTTTTTGCGTATCCTCAGTACACATGGTCTCAGGCTCCAACCAAATACCCTTCCAAGACTAAGGCAGCCATAGCTGATATTGAGGTTACTTTGATAGAGACACATGCAAACCTTAGAATTCTGTCAAGGCGAAGCCCCAGGCAATTGTCAAAACTGGTCTCTGCTTTTCAAACACTCTGCCTTACCATTCTTCATCTTAATGTCACCACCATTGACCCTTTGGTGCTTTATTCTATCAGTGCCAAGGTTGAAGAAGGATGCCACCTTGGCTCTGCGGAGGATATAGCAACAGCAGTTCATCACTTGCTCAGAAGAATTGAGGAAGAAGTTTCCCTATGCGGTTGA 942 0.4459 MALLETLSSNELYNFIIHDTISATPFSSHCDSSPDANVLLENRGMNPQEHDPASSFGNVLSRSRKRHSDELEVPEVAQGRKKRRRKPRVCKNKEEAETQRMTHIAVERNRRKQMNEHLAVLRSLMPESYVQRGDQASIVGGAIEFVKELEHLLQSLEAKKLQILQQVVVAQTNNEDSSSSSSSCSASSIFKLMSPPFSQFFAYPQYTWSQAPTKYPSKTKAAIADIEVTLIETHANLRILSRRSPRQLSKLVSAFQTLCLTILHLNVTTIDPLVLYSISAKVEEGCHLGSAEDIATAVHHLLRRIEEEVSLCG 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g01037 313 MobiDBLite consensus disorder prediction 42 97 - -
Accr9g01037 313 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 97 167 IPR036638 GO:0046983
Accr9g01037 313 PANTHER MAX DIMERIZATION, MAD 47 309 - -
Accr9g01037 313 CDD bHLH_AtFAMA_like 101 160 - -
Accr9g01037 313 MobiDBLite consensus disorder prediction 62 79 - -
Accr9g01037 313 Pfam Helix-loop-helix DNA-binding domain 99 150 IPR011598 GO:0046983
Accr9g01037 313 SMART finulus 104 155 IPR011598 GO:0046983
Accr9g01037 313 Coils Coil 146 166 - -
Accr9g01037 313 Gene3D - 90 167 IPR036638 GO:0046983
Accr9g01037 313 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 98 149 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr9g01037 Accr-Chr9 12272146 12273907 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr9g01037 90 282 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G72210 58.673 1.61e-65 206
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Accr9g01037 HLH 1.2e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr9g01037 - - qlo:115970749 404.445