Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g01009 ATGAAAGGGCGCTCGCACCGCCTGCAGAGTTCGGACCCTCCCGACGACTGGATTGATGGTTCTTGGACTGTGGATTGCGTATGTGGTGTGAATTTTGACGATGGGGAGGAGATGGTGAATTGTGACGAGTGCGGTGTGTGGGTGCACACGCGTTGCTCTCGATATGTTAAAGGAGATGATATGTTTGTATGCGATAAGTGCAAGAGCAAGATTAATCGATCTGATACGGAGGAAAAAGAGGTGGCCCAACTGTTGGCTGAGCTCCCTACGAAGACCGTGAGAATGGAGAATTCCTTTGCACCCATCGGACCTCCTCGACGTCCTTTCCTACCTATGGAGGAGAGGGTGCACATTCAAGGAATTCCTGGAGGCGATCCTTCCCTTTTTGGTGGGCTATCCTCTATTTTTAATCGGCAGTTATGGAAATGCACTGGGTATGTTCCCAAACAGTTTAATTTTCAGTATAGGGAATTTCCCTGCTGGAATGAGAATTCCACGAGGGAGGAGGATAATGAGAATCCTATTAATAAAGGGGCTGGAGTTCTATTTTCCTTGTCAAAGGAGAGTATATCGGCCACCCCTATTGCAACTTTAGTTGACATGAGAGCTAGGGATGGAGAAGATGGTTCTGACCTGAATAAGTCTCTGAAAGCGATGAAAAAGTGTGATAGTGAAGATGTAGCAGCTATTAGGCGTGCCCAGAATGGAATGAAGAAGGAGAGAAGTTTGCTTCGGTCTGTTATGCATTCAGGTAAGCAGAAAAAAGAAGAGTTAGGGACATCCAAAGATCGCAGTGGAAAGAAGAGGATTAAAACTTCGGACAAAGAGGCAGATCCCAAGAGGAGAACTTCACATACTTCGAAAACAGCATTTACACCCACCAGTGATGCAAAACAATTGGAATTTTATGAAGACAGAGGTCTGAAGAATTTCAAGACTGATACATGGAGCGTAAAGAGTAAAACTTTGAAAGACATTGTGGTTCAGGAACACGTTTCAAATAATTACGCTGTTGTGGATACTATTATGGAGGAGCCAAATATCAACTCAGCCGCTACTGAGGATTCTTCAGAAGCCTTGTATCCTGACACGGCAAGACATAGTTTTTCAGTTGGACGAGAAATAGCAGCAGAGAAAACTGAAAATAAGGCTCCTTCTGTTTCTGAAATTTCTTCCAAGACTGATGATAACATTTCACCATATTTGAAGAATAATTCTGCTGGAAATGCTTCAATTAAAGAAGAGGAAGGAGATGGCCTGGCGGGTAATAATGCAGATGACATTATAGGAGTAAGAAACACAGTAAGTCCTGCAGAAGAAGATCTTTGTGGTACTGCACCTCCAGAGCACAAGGACAACCAGGATTCCCAAGATTTTGACTATGAAACGTGTCCTAGCTCTGGACAGAGCAATCTTGAGGTGAAGAGAGAAGGGGATAACGATAATTTTGGAAAGCGTCTGATTTCTCATTCTTCTAGCATGAATGATCTGAAAAATGACGAGGAACTGCCTAAACACAAATCTGATCACCTTAATGACAGTGTGGTGACCAATTCATCCTATGAAAATAAGGTGGAAGAGAGTGACAGGAAATTAGAAGTGATCATTGATTGTCATACCAATAATTCTGAGGCGTTATCATGTCATTTTTGTCCTGGAAAGCAAGAAATGACAGGGTCTGAAGGTCCAATGGAAACCCAGAGGGGTGTTTCAGAAATAGAAGATGGTTCTGGTTATGCTGAGGATCCATCAAAATCTGAAAGTACGTCGTGTCCTCATAAAGGTTCCTCAACTATGAATTCCAAAATTTCTGCCAGTGACCAAAAATCCGAGATTCCTAATCCTCTTGTCAAGCATGGATCAATGGAAGATTGCAACATGTACAATAAGAAAGAAAGTAATCAAAATGATATTGTGAGGGATGAAGTTTATAGGAAGTCTTCAAAAGAACGCCTGAAATCGTCTTCAAATCCTAATCTGAAAGCAATGCATTCAAGCAAAAGTGCACAAAAAGCTATTTTAAGGCAAGTCAGTGCAGATTCAAAAGATTTTGTTAATAGTTCATCTTCTACAGCATCTTTGGTTCATCCTACCGGAACTAATTTAGGCTTGAGCAAGTCTGATGAATCATTACTACACCAAAAGTCATTACAAGCGCCAAATAAGATTTCCTCTTCGGCCCCACAGAGAGGTGAAAAGATTAATCAGACAAACCTCCAACCTTCCTCTAAGGTGAACCAGAATCACGTGCCATCACCTTCACCAATATCTAATTCTTCTGCAATGCTAAGTGATGAGGAGCTTGCACTACTATTGCATCAAGAACTAAATAGCTCTCCCCGAGTTCCTCGTGTACCCCGAGCACGTCATGGGGGTAGCTTGCCAGTGCTAACTTCTCCTAGTGGTGCTAGCATGCTATCGAAGCGCACATCATCTGCTGGAGGAAAGGATTATTGTTTGTTTTCTAGGAGAAAATACAAGGATGCATCTAGAGATGGGCTTTGCAGTTCCCGTGAGCTTGAAGATGAATCTAAAAGGATAGAAAATGCATCATCATCCTCTGATCAGAAGAAAAAAGATATGGAATGTGTGGAAGAAGACGCTTCTGTAATGGAAAAACGCCACACATCTATGACAACCATAAATTCTATGACAAAGAATGTTACTCCTGCCTCTGCTGCCACTGCAAATAGTGGTTCAGCCTCCCCTCCTGAGGATCAAAACTTGTCATTTACCCGCAACTCACCAAAAAGTGTATCTGATGATGATAATGGAACTGCTGGAAGGCCAGCCCATCGCACTTTGCCTGGCTTCATCAATGAGATTATGAGCAAGGGTCGTCGGATAACATATGATGAGCTCTGTAATGCTGTGCTGCCACATTGGAATAACTTGAGGAAGCATAATGGAGACCGCTATGCTTACACAAGCCACTCTCAAGCTGTTCTTGATTGTTTGAGGAACCGGCCTGAATGGGCGAGGTTGGTTGATCGTGGTCCTAAGACAAATTCTACTAGGAAAAGGCGAAAGTTTGATGAAGAATCTGATGATAATGTAAGTAGCAAGGGCAGAACTGCAAAAGGAGGTGAAGGGAAGAATTTTGAGTTGCAAAAAGAAGACTACCCTAAAGGCAAGCGTAGTAAAGCACGGAAGCGCAGGCGTCTTGTTCTTCAGGGGATAGCAGTCAAGGAAGCCCGGAGAAGAAAGGCTGGTTCGGTAACTGATGAAGACGTTGGTCAATTCTCCAATTCTAGTGAGGAGAGCGAATTTAGCGAGGATGAGGATGGCAGAACTGGTCAAGTGGGAAGTGAATCTTCTGCTAGTTCAGATGAGGAAGGCAGCGCCTAA 3348 0.4313 MKGRSHRLQSSDPPDDWIDGSWTVDCVCGVNFDDGEEMVNCDECGVWVHTRCSRYVKGDDMFVCDKCKSKINRSDTEEKEVAQLLAELPTKTVRMENSFAPIGPPRRPFLPMEERVHIQGIPGGDPSLFGGLSSIFNRQLWKCTGYVPKQFNFQYREFPCWNENSTREEDNENPINKGAGVLFSLSKESISATPIATLVDMRARDGEDGSDLNKSLKAMKKCDSEDVAAIRRAQNGMKKERSLLRSVMHSGKQKKEELGTSKDRSGKKRIKTSDKEADPKRRTSHTSKTAFTPTSDAKQLEFYEDRGLKNFKTDTWSVKSKTLKDIVVQEHVSNNYAVVDTIMEEPNINSAATEDSSEALYPDTARHSFSVGREIAAEKTENKAPSVSEISSKTDDNISPYLKNNSAGNASIKEEEGDGLAGNNADDIIGVRNTVSPAEEDLCGTAPPEHKDNQDSQDFDYETCPSSGQSNLEVKREGDNDNFGKRLISHSSSMNDLKNDEELPKHKSDHLNDSVVTNSSYENKVEESDRKLEVIIDCHTNNSEALSCHFCPGKQEMTGSEGPMETQRGVSEIEDGSGYAEDPSKSESTSCPHKGSSTMNSKISASDQKSEIPNPLVKHGSMEDCNMYNKKESNQNDIVRDEVYRKSSKERLKSSSNPNLKAMHSSKSAQKAILRQVSADSKDFVNSSSSTASLVHPTGTNLGLSKSDESLLHQKSLQAPNKISSSAPQRGEKINQTNLQPSSKVNQNHVPSPSPISNSSAMLSDEELALLLHQELNSSPRVPRVPRARHGGSLPVLTSPSGASMLSKRTSSAGGKDYCLFSRRKYKDASRDGLCSSRELEDESKRIENASSSSDQKKKDMECVEEDASVMEKRHTSMTTINSMTKNVTPASAATANSGSASPPEDQNLSFTRNSPKSVSDDDNGTAGRPAHRTLPGFINEIMSKGRRITYDELCNAVLPHWNNLRKHNGDRYAYTSHSQAVLDCLRNRPEWARLVDRGPKTNSTRKRRKFDEESDDNVSSKGRTAKGGEGKNFELQKEDYPKGKRSKARKRRRLVLQGIAVKEARRRKAGSVTDEDVGQFSNSSEESEFSEDEDGRTGQVGSESSASSDEEGSA 1115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g01009 1115 MobiDBLite consensus disorder prediction 573 671 - -
Accr9g01009 1115 MobiDBLite consensus disorder prediction 376 425 - -
Accr9g01009 1115 MobiDBLite consensus disorder prediction 797 811 - -
Accr9g01009 1115 MobiDBLite consensus disorder prediction 459 473 - -
Accr9g01009 1115 MobiDBLite consensus disorder prediction 874 922 - -
Accr9g01009 1115 MobiDBLite consensus disorder prediction 996 1115 - -
Accr9g01009 1115 SUPERFAMILY FYVE/PHD zinc finger 14 72 IPR011011 -
Accr9g01009 1115 MobiDBLite consensus disorder prediction 780 814 - -
Accr9g01009 1115 MobiDBLite consensus disorder prediction 996 1044 - -
Accr9g01009 1115 MobiDBLite consensus disorder prediction 495 512 - -
Accr9g01009 1115 ProSitePatterns Zinc finger PHD-type signature. 26 67 IPR019786 -
Accr9g01009 1115 MobiDBLite consensus disorder prediction 582 611 - -
Accr9g01009 1115 MobiDBLite consensus disorder prediction 233 285 - -
Accr9g01009 1115 MobiDBLite consensus disorder prediction 1100 1115 - -
Accr9g01009 1115 MobiDBLite consensus disorder prediction 384 411 - -
Accr9g01009 1115 MobiDBLite consensus disorder prediction 830 933 - -
Accr9g01009 1115 SMART PHD_3 25 68 IPR001965 -
Accr9g01009 1115 MobiDBLite consensus disorder prediction 438 513 - -
Accr9g01009 1115 MobiDBLite consensus disorder prediction 233 293 - -
Accr9g01009 1115 PANTHER UNCHARACTERIZED 1 1107 - -
Accr9g01009 1115 MobiDBLite consensus disorder prediction 1057 1074 - -
Accr9g01009 1115 MobiDBLite consensus disorder prediction 634 652 - -
Accr9g01009 1115 MobiDBLite consensus disorder prediction 737 760 - -
Accr9g01009 1115 MobiDBLite consensus disorder prediction 444 458 - -
Accr9g01009 1115 MobiDBLite consensus disorder prediction 653 671 - -
Accr9g01009 1115 MobiDBLite consensus disorder prediction 830 873 - -
Accr9g01009 1115 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 14 75 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr9g01009 Accr-Chr9 11795344 11800694 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr9g01009 24 67 PHD Transcription Factor Family AT5G22260 42.553 6.33e-06 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr9g01009 - - pcin:129322189 1725.29