Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g01008 ATGAAAGGGCGCTCGCACCGCCTGCAGAGTTCGGACCCTCCCGACGACTGGATTGATGGTTCTTGGACTGTGGATTGCGTATGTGGTGTGAATTTTGACGATGGGGAGGAGATGGTGAATTGTGACGAGTGCGGTGTGTGGGTGCACACGCGTTGCTCTCGATATGTTAAAGGAGATGATATGTTTGTATGCGATAAGTGCAAGAGCAAGATTAATCGATCTGATACGGAGGAAAAAGAGGTGGCCCAACTGTTGGCTGAGCTCCCTACGAAGACCGTGAGAATGGAGAATTCCTTTGCACCCATCGGACCTCCTCGACGTCCTTTCCTACCTATGGAGGAGAGGGTGCACATTCAAGGAATTCCTGGAGGCGATCCTTCCCTTTTTGGTGGGCTATCCTCTATTTTTAATCGGCAGTTATGGAAATGCACTGGGTATGTTCCCAAACAGTTTAATTTTCAGTATAGGGAATTTCCCTGCTGGAATGAGAATTCCACGAGGGAGGAGGATAATGAGAATCCTATTAATAAAGGGGCTGGAGTTCTATTTTCCTTGTCAAAGGAGAGTATATCGGCCACCCCTATTGCAACTTTAGTTGACATGAGAGCTAGGGATGGAGAAGATGGTTCTGACCTGAATAAGTCTCTGAAAGCGATGAAAAAGTGTGATAGTGAAGATGTAGCAGCTATTAGGCGTGCCCAGAATGGAATGAAGAAGGAGAGAAGTTTGCTTCGGTCTGTTATGCATTCAGGTAAGCAGAAAAAAGAAGAGTTAGGGACATCCAAAGATCGCAGTGGAAAGAAGAGGATTAAAACTTCGGACAAAGAGGCAGATCCCAAGAGGAGAACTTCACATACTTCGAAAACAGACAGAGGTCTGAAGAATTTCAAGACTGATACATGGAGCGTAAAGAGTAAAACTTTGAAAGACATTGTGGTTCAGGAACACGTTTCAAATAATTACGCTGTTGTGGATACTATTATGGAGGAGCCAAATATCAACTCAGCCGCTACTGAGGATTCTTCAGAAGCCTTGTATCCTGACACGGCAAGACATAGTTTTTCAGTTGGACGAGAAATAGCAGCAGAGAAAACTGAAAATAAGGCTCCTTCTGTTTCTGAAATTTCTTCCAAGACTGATGATAACATTTCACCATATTTGAAGAATAATTCTGCTGGAAATGCTTCAATTAAAGAAGAGGAAGGAGATGGCCTGGCGGGTAATAATGCAGATGACATTATAGGAGTAAGAAACACAGTAAGTCCTGCAGAAGAAGATCTTTGTGGTACTGCACCTCCAGAGCACAAGGACAACCAGGATTCCCAAGATTTTGACTATGAAACGTGTCCTAGCTCTGGACAGAGCAATCTTGAGGTGAAGAGAGAAGGGGATAACGATAATTTTGGAAAGCGTCTGATTTCTCATTCTTCTAGCATGAATGATCTGAAAAATGACGAGGAACTGCCTAAACACAAATCTGATCACCTTAATGACAGTGTGGTGACCAATTCATCCTATGAAAATAAGGTGGAAGAGAGTGACAGGAAATTAGAAGTGATCATTGATTGTCATACCAATAATTCTGAGGCGTTATCATGTCATTTTTGTCCTGGAAAGCAAGAAATGACAGGGTCTGAAGGTCCAATGGAAACCCAGAGGGGTGTTTCAGAAATAGAAGATGGTTCTGGTTATGCTGAGGATCCATCAAAATCTGAAAGTACGTCGTGTCCTCATAAAGGTTCCTCAACTATGAATTCCAAAATTTCTGCCAGTGACCAAAAATCCGAGATTCCTAATCCTCTTGTCAAGCATGGATCAATGGAAGATTGCAACATGTACAATAAGAAAGAAAGTAATCAAAATGATATTGTGAGGGATGAAGTTTATAGGAAGTCTTCAAAAGAACGCCTGAAATCGTCTTCAAATCCTAATCTGAAAGCAATGCATTCAAGCAAAAGTGCACAAAAAGCTATTTTAAGGCAAGTCAGTGCAGATTCAAAAGATTTTGTTAATAGTTCATCTTCTACAGCATCTTTGGTTCATCCTACCGGAACTAATTTAGGCTTGAGCAAGTCTGATGAATCATTACTACACCAAAAGTCATTACAAGCGCCAAATAAGATTTCCTCTTCGGCCCCACAGAGAGGTGAAAAGATTAATCAGACAAACCTCCAACCTTCCTCTAAGGTGAACCAGAATCACGTGCCATCACCTTCACCAATATCTAATTCTTCTGCAATGCTAAGTGATGAGGAGCTTGCACTACTATTGCATCAAGAACTAAATAGCTCTCCCCGAGTTCCTCGTGTACCCCGAGCACGTCATGGGGGTAGCTTGCCAGTGCTAACTTCTCCTAGTGGTGCTAGCATGCTATCGAAGCGCACATCATCTGCTGGAGGAAAGGATTATTGTTTGTTTTCTAGGAGAAAATACAAGGATGCATCTAGAGATGGGCTTTGCAGTTCCCGTGAGCTTGAAGATGAATCTAAAAGGATAGAAAATGCATCATCATCCTCTGATCAGAAGAAAAAAGATATGGAATGTGTGGAAGAAGACGCTTCTGTAATGGAAAAACGCCACACATCTATGACAACCATAAATTCTATGACAAAGAATGTTACTCCTGCCTCTGCTGCCACTGCAAATAGTGGTTCAGCCTCCCCTCCTGAGGATCAAAACTTGTCATTTACCCGCAACTCACCAAAAAGTGTATCTGATGATGATAATGGAACTGCTGGAAGGCCAGCCCATCGCACTTTGCCTGGCTTCATCAATGAGATTATGAGCAAGGGTCGTCGGATAACATATGATGAGCTCTGTAATGCTGTGCTGCCACATTGGAATAACTTGAGGAAGCATAATGGAGACCGCTATGCTTACACAAGCCACTCTCAAGCTGTTCTTGATTGTTTGAGGAACCGGCCTGAATGGGCGAGGTTGGTTGATCGTGGTCCTAAGACAAATTCTACTAGGAAAAGGCGAAAGTTTGATGAAGAATCTGATGATAATGTAAGTAGCAAGGGCAGAACTGCAAAAGGAGGTGAAGGGAAGAATTTTGAGTTGCAAAAAGAAGACTACCCTAAAGGCAAGCGTAGTAAAGCACGGAAGCGCAGGCGTCTTGTTCTTCAGGGGATAGCAGTCAAGGAAGCCCGGAGAAGAAAGGCTGGTTCGGTAACTGATGAAGACGTTGGTCAATTCTCCAATTCTAGTGAGGAGAGCGAATTTAGCGAGGATGAGGATGGCAGAACTGGTCAAGTGGGAAGTGAATCTTCTGCTAGTTCAGATGAGGAAGGCAGCGCCTAA 3303 0.4323 MKGRSHRLQSSDPPDDWIDGSWTVDCVCGVNFDDGEEMVNCDECGVWVHTRCSRYVKGDDMFVCDKCKSKINRSDTEEKEVAQLLAELPTKTVRMENSFAPIGPPRRPFLPMEERVHIQGIPGGDPSLFGGLSSIFNRQLWKCTGYVPKQFNFQYREFPCWNENSTREEDNENPINKGAGVLFSLSKESISATPIATLVDMRARDGEDGSDLNKSLKAMKKCDSEDVAAIRRAQNGMKKERSLLRSVMHSGKQKKEELGTSKDRSGKKRIKTSDKEADPKRRTSHTSKTDRGLKNFKTDTWSVKSKTLKDIVVQEHVSNNYAVVDTIMEEPNINSAATEDSSEALYPDTARHSFSVGREIAAEKTENKAPSVSEISSKTDDNISPYLKNNSAGNASIKEEEGDGLAGNNADDIIGVRNTVSPAEEDLCGTAPPEHKDNQDSQDFDYETCPSSGQSNLEVKREGDNDNFGKRLISHSSSMNDLKNDEELPKHKSDHLNDSVVTNSSYENKVEESDRKLEVIIDCHTNNSEALSCHFCPGKQEMTGSEGPMETQRGVSEIEDGSGYAEDPSKSESTSCPHKGSSTMNSKISASDQKSEIPNPLVKHGSMEDCNMYNKKESNQNDIVRDEVYRKSSKERLKSSSNPNLKAMHSSKSAQKAILRQVSADSKDFVNSSSSTASLVHPTGTNLGLSKSDESLLHQKSLQAPNKISSSAPQRGEKINQTNLQPSSKVNQNHVPSPSPISNSSAMLSDEELALLLHQELNSSPRVPRVPRARHGGSLPVLTSPSGASMLSKRTSSAGGKDYCLFSRRKYKDASRDGLCSSRELEDESKRIENASSSSDQKKKDMECVEEDASVMEKRHTSMTTINSMTKNVTPASAATANSGSASPPEDQNLSFTRNSPKSVSDDDNGTAGRPAHRTLPGFINEIMSKGRRITYDELCNAVLPHWNNLRKHNGDRYAYTSHSQAVLDCLRNRPEWARLVDRGPKTNSTRKRRKFDEESDDNVSSKGRTAKGGEGKNFELQKEDYPKGKRSKARKRRRLVLQGIAVKEARRRKAGSVTDEDVGQFSNSSEESEFSEDEDGRTGQVGSESSASSDEEGSA 1100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g01008 1100 MobiDBLite consensus disorder prediction 619 637 - -
Accr9g01008 1100 MobiDBLite consensus disorder prediction 815 918 - -
Accr9g01008 1100 MobiDBLite consensus disorder prediction 981 1029 - -
Accr9g01008 1100 MobiDBLite consensus disorder prediction 638 656 - -
Accr9g01008 1100 MobiDBLite consensus disorder prediction 369 396 - -
Accr9g01008 1100 SUPERFAMILY FYVE/PHD zinc finger 14 72 IPR011011 -
Accr9g01008 1100 ProSitePatterns Zinc finger PHD-type signature. 26 67 IPR019786 -
Accr9g01008 1100 MobiDBLite consensus disorder prediction 722 745 - -
Accr9g01008 1100 MobiDBLite consensus disorder prediction 423 509 - -
Accr9g01008 1100 MobiDBLite consensus disorder prediction 247 293 - -
Accr9g01008 1100 MobiDBLite consensus disorder prediction 815 858 - -
Accr9g01008 1100 MobiDBLite consensus disorder prediction 981 1100 - -
Accr9g01008 1100 SMART PHD_3 25 68 IPR001965 -
Accr9g01008 1100 MobiDBLite consensus disorder prediction 1085 1100 - -
Accr9g01008 1100 MobiDBLite consensus disorder prediction 361 410 - -
Accr9g01008 1100 MobiDBLite consensus disorder prediction 480 497 - -
Accr9g01008 1100 MobiDBLite consensus disorder prediction 782 796 - -
Accr9g01008 1100 PANTHER UNCHARACTERIZED 1 1092 - -
Accr9g01008 1100 MobiDBLite consensus disorder prediction 542 656 - -
Accr9g01008 1100 MobiDBLite consensus disorder prediction 444 458 - -
Accr9g01008 1100 MobiDBLite consensus disorder prediction 1042 1059 - -
Accr9g01008 1100 MobiDBLite consensus disorder prediction 429 443 - -
Accr9g01008 1100 MobiDBLite consensus disorder prediction 567 596 - -
Accr9g01008 1100 MobiDBLite consensus disorder prediction 765 799 - -
Accr9g01008 1100 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 14 75 IPR013083 -
Accr9g01008 1100 MobiDBLite consensus disorder prediction 859 907 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr9g01008 Accr-Chr9 11795344 11800694 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr9g01008 24 67 PHD Transcription Factor Family AT5G22260 42.553 6.55e-06 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr9g01008 - - pcin:129322189 1685.23