Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g00980 ATGGATTCCGGCGCCTGTTTGTCTGCTGGCAAGTTTGAGAACGATGATGCTGATGGTGTGGAGATGGATCCTACCGGACGTTACATTCGGTATGATGATATGTTGGGCAGAGGAGCATTCAAGACTGTATATAAGGCATTTGATGAAGTTGATGGGATGGAAGTTGCCTGGAGCAAAGTGGATATTGTGCACGTTTTGCAGTCTCCAGTTAAACTGGAAATGTTATATTCTGAGGTGCATCTCCTAAAGTCACTGCAACATGAAAAAATCCTCAAGTGCTATAATTCTTGGGTGGATGATAAAACCAAGACTATCAACATGATAACTGAATTATTCGTCTCTGGGAGTTTGAGGCAGTATAGACGAATGCATAAGAAGGTTGAATTGAAGGCCATCAAGAACTGGGCAAGGCAAATTCTTCAAGGTTTATGCTATTTGCACAGCCACAATCCTCCTATCATCCATAGAGATTTGAAATGTGATAATATTTTTATTAATGGTAATACTGGAGAAATTAAGATTGGAGATCTTGGATTGGCAGCTGTCCTACAGGAACCTACCGCACACTCTGTCATTGGGACGCCAGAATTCATGGCTCCTGAGCTTTATGATGAAGAGTACAATGAACTTGTTGACATATATTCTTTTGGTATGTGCATGTTAGAAATGATAACCTGTGAGTACCCATACAACGAATGCAAAAATCATGCACAGATATACAAGAAAGTTACCTCTGGAATAAAGCCTGCCGCTCTTGGTAAAGTGAGTGATCCCCAAGTAAGGCAATTCATAGAGAAATGTTTAGTTCCAGCATCTATGAGATTGCCTGCATCTGAGCTATTGAAGGATCCATTTCTTGCTACTGACGAGATGAAGGAGGTCAAACAGGCACTGCAGTTGCCCATTCACGCGACACTGCCAACAACTGAGCCACATCCTACGGAGATAAACCAAAGGGTCAAGGATGTTTTGCCTGGCTCCTGTTTGAAAGTTACTGAAGAAACTACCCAAATATTAACTCTGGAATTCCCTAGGACAAGTGAGGGTACTGGATTCAGACTACGAGGGGAGAAAAATGCTTCAGACAAAACAATTTCACTAACTCTGCACATTGCTAAGCCAAATGGTACTGCGAATAAAATCGAGTTTCCGTTCTATCTTGATTCTGATAGGGCAATTTCAATTGCTGAGGAGATGGTAGGAAGTCTGAATCTCTCTGCTGAGGAAGCGAGTGTTATCGCTGAACTGATGCACAACATGATTGTCAAACTTGTTCCTAACTGGGGAGGGTCACGTCAACAATTATCATCTGGAGCAGATTGTCGGGATGGCAATTCTCATGTAGTTGTAAAGGGAGGATCACCTAGTGATGAGGATCTTGTTAAGTCACAGGCTCTTGAGGAAGATCAAGAGAAACATGAATCAATCATTTCTGCTGAGGATAATACTTTCTTTGCTGGAGTCTCTGAGCTGTCGAGCATAAACTATCCTTCTCTCCCAGACAAAGATCAATGTGACCAGCTGCCATCGGAGCTTGATGCAATAGAAAACACAAGAACAGGATGGATTGGAAAACAACTTTTGTATTTTGACCTTTCGAGTTTTTTCCCCCTATCATCCTTTTTCCCTTACATTTTCCCCCATTATTTGAGGTCAATATCAATTGATTTCGGTTCCTTGGAATCAGGCCCTGTATTTTTTCATTGTCAACAATACCTTGGAATGCTATGA 1731 0.4165 MDSGACLSAGKFENDDADGVEMDPTGRYIRYDDMLGRGAFKTVYKAFDEVDGMEVAWSKVDIVHVLQSPVKLEMLYSEVHLLKSLQHEKILKCYNSWVDDKTKTINMITELFVSGSLRQYRRMHKKVELKAIKNWARQILQGLCYLHSHNPPIIHRDLKCDNIFINGNTGEIKIGDLGLAAVLQEPTAHSVIGTPEFMAPELYDEEYNELVDIYSFGMCMLEMITCEYPYNECKNHAQIYKKVTSGIKPAALGKVSDPQVRQFIEKCLVPASMRLPASELLKDPFLATDEMKEVKQALQLPIHATLPTTEPHPTEINQRVKDVLPGSCLKVTEETTQILTLEFPRTSEGTGFRLRGEKNASDKTISLTLHIAKPNGTANKIEFPFYLDSDRAISIAEEMVGSLNLSAEEASVIAELMHNMIVKLVPNWGGSRQQLSSGADCRDGNSHVVVKGGSPSDEDLVKSQALEEDQEKHESIISAEDNTFFAGVSELSSINYPSLPDKDQCDQLPSELDAIENTRTGWIGKQLLYFDLSSFFPLSSFFPYIFPHYLRSISIDFGSLESGPVFFHCQQYLGML 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g00980 576 CDD STKc_WNK 27 286 - -
Accr9g00980 576 Gene3D Transferase(Phosphotransferase) domain 1 112 294 - -
Accr9g00980 576 FunFam Probable serine/threonine-protein kinase WNK1 14 110 - -
Accr9g00980 576 SUPERFAMILY Protein kinase-like (PK-like) 31 325 IPR011009 -
Accr9g00980 576 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 15 471 - -
Accr9g00980 576 SMART serkin_6 29 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr9g00980 576 ProSiteProfiles Protein kinase domain profile. 29 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr9g00980 576 ProSitePatterns Serine/Threonine protein kinases active-site signature. 153 165 IPR008271 GO:0004672|GO:0006468
Accr9g00980 576 FunFam probable serine/threonine-protein kinase WNK9 112 291 - -
Accr9g00980 576 Pfam Protein kinase domain 33 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr9g00980 576 Gene3D - 363 449 - -
Accr9g00980 576 Gene3D Phosphorylase Kinase; domain 1 13 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr9g00980 Accr-Chr9 11460893 11464110 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr9g00980 1 533 MAP Kinase Kinase Kinase AT5G41990 50.702 2.08e-179 516
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Accr9g00980 Pkinase 1e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr9g00980 K08867 - qsa:O6P43_024088 598.586