Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g00979 ATGGATTCCGACGCCTGTTTGTCTGATGGCAAGTTTGAGAACGATGGTGCTGATGTTGTGGAAAGGGATCCTACTGGACGTTACATTCGGTATGATGATATGTTGGGCAGAGGAGCATTCAAGACTGTATATAAGGCTTTTGATGAAGATGATGGGATGGAAGTCGCTTGGAGCAAAGTGGATGTTGTCCACGTTTTGCAGTCTCCACTTCAATTGGAAAGGTTATATTCTGAGGTCCATCTCCTAAAGTCATTGAAACATGAAAAAATCCTCAAGTGCTACAATTCTTGGGTGGACGATAAAAACAAAACTATCAACATGATAACTGAGTTATTCGTCTCTGGGAGTTTGAGGCAATATCGAAGAATGCATAAGAATGTTGAATTGAAGGCCATCAAGAACTGGGCCAGGCAAATTCTTCAAGGTTTATGCTATTTGCACGGCCACAATCCTCCTATCATCCACAGAGATTTGAAATGTGATAATATTTTCATTAATGGTAATACTGGAGAAGTTAAGATTGGAGATCTTGGATTGGCAGCTGTCCTACAGCAACCTAATGCACACACTGTCATTGGGACACCAGAATTCATGGCTCCTGAGCTTTATGATGAAGAGTACAATGAACTTGTTGACATATATTCTTTTGGTATGTGCATGTTAGAAATGATAACCTGTGAGTACCCATACAGCGAATGCAAAAATCATGCACAGATATTCAAGAAAGTTATCTCTGGAATAAAGCCTGCCGCTCTTGGTAAAGTGAGTGATCCCCAAGTGAGGCAATTCATAGAGAAATGTTTAGTTCCAGCATCTATGAGATTGCCTGCATCTGAGCTATTGAAGGATTCATTTCTTGCTACTGACAACATGAAGGAGGTCAAACACGCACTGCAGTTGCCCATTCACAAGACACTGCCAACAACTGAGCCACATCCTACTGAGATAGACCAAAGTGTCAAGGATGTTTTGCCTGGCTGTTTGAAAGTTACTGAAGAAACTCCTCAAATATTAACTCTAGAATTCCCTAGGACAAGTGAGAGTACTGGATTCAAGCTACGAGGGGAGAAAAATGCTTCAGACAGAACAATTTCACTAACTCTGCGCATTGCTGAGGCAAATGGTCCTGCAAAGAATATCGAATTTCCATTCTATCTTGATTCTGATACAGCAATTTCAATTGCTGAGGAGATGGTAGAAAGTCTGAATCTCCCTGCCGAGGACGAGAGTGTTATTGCTGAACTGATACAAACCATGATCGTCAGGCTTGTTCCTAAATGGAGAGTGTTACGTCAACAACTTTCATTTGGAGCAGATTGTTTGGATGGCGATTCTCATGTAGTTTTAAATGGGGGATCACCTTTAAGGTGCCAGGGTGATGAGGATCTTGTTGACTCACAGGTTCTTGAGGAAGATCAAGAGAAACATGAATCAATCATGCCAGGCATTTCAGCAGAGGATGCGATTGCAGTTACAGATGTCAAACATTTACATCCTGACTATACTGTCTTTGATGGAGACTCTGAGGGTTCCATTGCCAAAAGTTCCATTTCAGACTTCAGGCTATCTGATCAAGATGAATGCAATTGGGAGGGTGATAGTGGTAGATCTGATAGCTCAGCGAACTCAACTATGACGTTTACAGACTCGTGTGGCGATGAGCCCAATAATTCAGACCTGTCAAGCATCAATTTTCTCTACCTCGCAGACAAAGATCAATGCGACCAGCTGCCACCAGAGCTTGATGCAAGAAATACACAGTACCAACAATGCTTTCTTAAACTTGCGAAAATGAGCGAGGATGCAATAGAGAACACAAAAAGGAGATGGATTACTAGGAAGAAAATACCTGTAATGTGA 1860 0.4172 MDSDACLSDGKFENDGADVVERDPTGRYIRYDDMLGRGAFKTVYKAFDEDDGMEVAWSKVDVVHVLQSPLQLERLYSEVHLLKSLKHEKILKCYNSWVDDKNKTINMITELFVSGSLRQYRRMHKNVELKAIKNWARQILQGLCYLHGHNPPIIHRDLKCDNIFINGNTGEVKIGDLGLAAVLQQPNAHTVIGTPEFMAPELYDEEYNELVDIYSFGMCMLEMITCEYPYSECKNHAQIFKKVISGIKPAALGKVSDPQVRQFIEKCLVPASMRLPASELLKDSFLATDNMKEVKHALQLPIHKTLPTTEPHPTEIDQSVKDVLPGCLKVTEETPQILTLEFPRTSESTGFKLRGEKNASDRTISLTLRIAEANGPAKNIEFPFYLDSDTAISIAEEMVESLNLPAEDESVIAELIQTMIVRLVPKWRVLRQQLSFGADCLDGDSHVVLNGGSPLRCQGDEDLVDSQVLEEDQEKHESIMPGISAEDAIAVTDVKHLHPDYTVFDGDSEGSIAKSSISDFRLSDQDECNWEGDSGRSDSSANSTMTFTDSCGDEPNNSDLSSINFLYLADKDQCDQLPPELDARNTQYQQCFLKLAKMSEDAIENTKRRWITRKKIPVM 619
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g00979 619 SMART serkin_6 29 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr9g00979 619 ProSiteProfiles Protein kinase domain profile. 29 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr9g00979 619 CDD STKc_WNK 27 286 - -
Accr9g00979 619 Gene3D Phosphorylase Kinase; domain 1 13 110 - -
Accr9g00979 619 Pfam Protein kinase domain 33 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr9g00979 619 Gene3D Transferase(Phosphotransferase) domain 1 112 296 - -
Accr9g00979 619 FunFam Probable serine/threonine-protein kinase WNK1 14 110 - -
Accr9g00979 619 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 14 524 - -
Accr9g00979 619 ProSitePatterns Serine/Threonine protein kinases active-site signature. 153 165 IPR008271 GO:0004672|GO:0006468
Accr9g00979 619 MobiDBLite consensus disorder prediction 534 553 - -
Accr9g00979 619 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 364 420 IPR024678 GO:0004674|GO:0005524
Accr9g00979 619 MobiDBLite consensus disorder prediction 529 553 - -
Accr9g00979 619 SUPERFAMILY Protein kinase-like (PK-like) 24 298 IPR011009 -
Accr9g00979 619 Gene3D - 362 449 - -
Accr9g00979 619 FunFam probable serine/threonine-protein kinase WNK9 112 291 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr9g00979 Accr-Chr9 11445250 11447912 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr9g00979 17 618 MAP Kinase Kinase Kinase AT5G41990 51.236 0.0 542
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Accr9g00979 Pkinase 6.6e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr9g00979 K08867 - qsa:O6P43_024088 687.567