Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g00959 ATGGATGCTGAAATCAAAGGACGAATCGAGACCACTGTTCGGAGGATTCTGCAGGGATCAAACATGGACGAGGTCACCGAATCCAAAATCAGGAAGCAGGCCGCCAAAGAACTCGACCTCGACCTGTCGCAGCCTCAATACAAAGCCTTAGTGAAGCAGGTTGTGGAGCTTTTTATTCAGGAAAAGCAAGAGGAGCAGGAGGAGGAAGAAGAAGAAAATTCGCAAGAGGAAACTTACCAGGACCAGGAGTACGATGATGAGGGCAATCCTATTATCTGCAAGCTTTCAGCTCAGAGAAGGGTGACGATTCAAGAATTCAGAGGGAAAACACTGGTCTCTATTAGGGAGTACTATAGAAAGGACGGTAAAGAACTTCCGTCTTCGAAAGGAATAAGTTTGACAGAAGAGCAGTGGTCGGCCTTGAATAAGAATATACCTGCCATAGAAAAAGCCATTCAGAAACTGGAGTCGAACATGTGA 480 0.4583 MDAEIKGRIETTVRRILQGSNMDEVTESKIRKQAAKELDLDLSQPQYKALVKQVVELFIQEKQEEQEEEEEENSQEETYQDQEYDDEGNPIICKLSAQRRVTIQEFRGKTLVSIREYYRKDGKELPSSKGISLTEEQWSALNKNIPAIEKAIQKLESNM 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g00959 159 Pfam DEK C terminal domain 8 59 IPR014876 -
Accr9g00959 159 PIRSF RNA_polymII_KELP 1 159 IPR017415 -
Accr9g00959 159 MobiDBLite consensus disorder prediction 62 86 - -
Accr9g00959 159 MobiDBLite consensus disorder prediction 62 84 - -
Accr9g00959 159 PANTHER RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR 5 157 IPR045125 GO:0003713|GO:0060261
Accr9g00959 159 SUPERFAMILY ssDNA-binding transcriptional regulator domain 92 155 IPR009044 GO:0003677|GO:0006355
Accr9g00959 159 FunFam RNA polymerase II transcriptional coactivator KELP 82 158 - -
Accr9g00959 159 Coils Coil 52 82 - -
Accr9g00959 159 Pfam Transcriptional Coactivator p15 (PC4) 93 143 IPR003173 GO:0003677|GO:0006355
Accr9g00959 159 Gene3D Transcriptional Coactivator Pc4; Chain A 81 159 IPR009044 GO:0003677|GO:0006355
Accr9g00959 159 ProSiteProfiles DEK C-terminal (DEK-C) domain profile. 3 60 IPR014876 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr9g00959 Accr-Chr9 11184054 11185874 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Coactivator p15 Accr9g00959 DEK_C 3.6e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr9g00959 K25815 - gmx:100305633 204.912
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr9g00959 9 11184054 11185874 Accr9g00959 9 11184054 11185874 ECH