Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g00938 ATGGCTCATTCCTCATGTTTCATCTTCGTCTTCTTCCTCCTCCTCTTCCTTATCTATCCCACAGCATCAAGCTCTAATATCTGCGAGACATCTTGCGACATGGACGTAACTCCGATTCAGTTCCCTTTCCAGTTAGTCGGAGACAACGAAGCAAATCAAATCAATAGAACTAGTCGTTGTGGTTACCCTGGTTTCGAACTTTCCTGCAACGAAGGCCGAACCATGATCCATCTCCCACACTCTGGAAACTTCCTGGTTGATACAATCTCCTACGATAACCAAAAGCTTTGGATCAGAGACCCCGAAAATTGCCTCCCAAAACGATTCTTAAACAACAGCTTCAACCTCAAAGGTTCAATCTTTCAACTCAGCGGTGATTATATTCTCATGGACTTCACATTTTACAACTGCTCCTCCAAAGTCACCCTACCGTACCCACTACCACCCGTCCCTTGCCTGAGCTCCGACCACAACCCGAACTTCTCGGTGGTCGCCGTGTGGTCGGGTCCTCAGATTGCCCCATTTGTCGCACAGTGTGACCCGATTTCCTCTGCTTCACTTCCTTATTCTGTCACCAACGGACCATACTGGATGAACCTGAACGATGAAATAGGCCTGCAATGGAACACGCCAAGCTGTGGAGACTGTGTAGCGAAACAAGGACGGTGTGATTTTTTGACGGATACAGGTCTCGAAGTTGCTTGTTATTTACCACACCGACCTGGTCTTTCAAAATTTGCCAAGCTTGGATTAAGCTTAGGTATGGGAATTCCTGGATTGCTCTGTGTGATTTGGATTGTGTACTTGTGTACGGGGAAGCGAAGAGAGAGCGAAGAGCGAAGGAGGAGGAGCGATATTGAACTGAATCATAATATTGCCGGTCGGAGCTCTGTAGTGGTTATGGGGCTCGACGGAGAAACCATAGAGAAGTATCCGATGACCCGGATTGGCGATAGTGGGCGATTACCCGACCCGAACAACAACGTGTGCTCCATATGTCTCGGTGAGTACCTACCCCAAGACGCGTTAAGGACTATACCAGATTGTAATCATTATTTTCATGCGAATTGTATAGATTCATGGCTCCACATGAATGCTTCTTGTCCATTGTGTCGAAAATTACCTCACTCCTAA 1134 0.4709 MAHSSCFIFVFFLLLFLIYPTASSSNICETSCDMDVTPIQFPFQLVGDNEANQINRTSRCGYPGFELSCNEGRTMIHLPHSGNFLVDTISYDNQKLWIRDPENCLPKRFLNNSFNLKGSIFQLSGDYILMDFTFYNCSSKVTLPYPLPPVPCLSSDHNPNFSVVAVWSGPQIAPFVAQCDPISSASLPYSVTNGPYWMNLNDEIGLQWNTPSCGDCVAKQGRCDFLTDTGLEVACYLPHRPGLSKFAKLGLSLGMGIPGLLCVIWIVYLCTGKRRESEERRRRSDIELNHNIAGRSSVVVMGLDGETIEKYPMTRIGDSGRLPDPNNNVCSICLGEYLPQDALRTIPDCNHYFHANCIDSWLHMNASCPLCRKLPHS 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g00938 377 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 293 376 IPR013083 -
Accr9g00938 377 Pfam Ring finger domain 329 372 IPR001841 -
Accr9g00938 377 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 6 375 IPR046948 -
Accr9g00938 377 SUPERFAMILY RING/U-box 325 373 - -
Accr9g00938 377 ProSiteProfiles Zinc finger RING-type profile. 330 372 IPR001841 -
Accr9g00938 377 SMART ring_2 330 371 IPR001841 -
Accr9g00938 377 Pfam Wall-associated receptor kinase galacturonan-binding 28 100 IPR025287 GO:0030247
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr9g00938 Accr-Chr9 10975936 10977069 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr9g00938 30 375 C3H Transcription Factor Family AT2G46495 32.295 8.75e-51 171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr9g00938 - - pcin:129323052 336.265