Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g00921 ATGGAGGGATTTCCAGATAGAGATACTCAGCTTGAACCACATAACGTCGCCGATATAGGCTCATCTCTGTCCAATCTGATATTATCAGGTGGGACAAACCCCTTAGATTCTATTTTCTCTCACTGCCCTCAAACAAATACCACAAGCAACCCCATGTTTGATGCCTTAGGTTCGTGCGGTTTTGAGCCTCTGGGCTCGTCGGTGTATCTTCGTCAAAGAGACATTTTGCAGAAATTCTACGAGGACAACCGAGTGAGTAGTTCACTCGGTGGTCTATCATCGACAAATCAACGTCTAGACTATGCAGCGCCAACATCTTACTCGTACATAAACCCCTGTAAAAAAAAGTTATACAGGGGAGTGAGACAGAGACATTGGGGAAAATGGGTTGCAGAAATTAGACTTCCTCAGAACAGAATGAGAGTGTGGCTAGGCACTTATGAAACTGCCGAAGCTGCTGCTTATGCTTACGATCGTGCGGCTTATAAGCTCCGAGGCGAATATGCTCGTTTGAATTTCCCGAATCTAAAGGACCCCAGTAAGTTAGGATTCGGAGATAGCTCCAGATTAAATGCTCTGAAAGCCTCTGTAGATGGTAAAATTCAAGCTATCTGTCAAAAGGTGAAGAGAGAGAGAGCCAAGAAGAATAGCGCTAAGAAGCAGGCTAATCCAATTCCCAGCCCAGAACAGAGTGAGAAATCACAAAAGATTGAGTCTTCATCTTGTTCATCATCGTCGTTACCATTGTCCCCATTAGTTTTTGATGATAACTGGACAAACGAGTTCATTTCGCCGACGATTTCAGAGGACGGAATATGGAAGGGAGAGAACTCCCCGTCCACCGTCTCAACTGATTTTCCGACAATGGTAACAACGGAGGAATCAGAATTCGAAGGTAACACCCTGGCGAGGATGCCTTCCTTTGATCCCGAGTTAATCTGGGAAGTCCTGGCCAATTAA 960 0.451 MEGFPDRDTQLEPHNVADIGSSLSNLILSGGTNPLDSIFSHCPQTNTTSNPMFDALGSCGFEPLGSSVYLRQRDILQKFYEDNRVSSSLGGLSSTNQRLDYAAPTSYSYINPCKKKLYRGVRQRHWGKWVAEIRLPQNRMRVWLGTYETAEAAAYAYDRAAYKLRGEYARLNFPNLKDPSKLGFGDSSRLNALKASVDGKIQAICQKVKRERAKKNSAKKQANPIPSPEQSEKSQKIESSSCSSSSLPLSPLVFDDNWTNEFISPTISEDGIWKGENSPSTVSTDFPTMVTTEESEFEGNTLARMPSFDPELIWEVLAN 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g00921 319 SMART rav1_2 117 180 IPR001471 GO:0003700|GO:0006355
Accr9g00921 319 Gene3D AP2/ERF domain 117 175 IPR036955 GO:0003700|GO:0006355
Accr9g00921 319 PRINTS Ethylene responsive element binding protein signature 118 129 IPR001471 GO:0003700|GO:0006355
Accr9g00921 319 PRINTS Ethylene responsive element binding protein signature 140 156 IPR001471 GO:0003700|GO:0006355
Accr9g00921 319 MobiDBLite consensus disorder prediction 212 247 - -
Accr9g00921 319 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 42 317 - -
Accr9g00921 319 Pfam AP2 domain 118 167 IPR001471 GO:0003700|GO:0006355
Accr9g00921 319 ProSiteProfiles AP2/ERF domain profile. 117 174 IPR001471 GO:0003700|GO:0006355
Accr9g00921 319 SUPERFAMILY DNA-binding domain 117 174 IPR016177 GO:0003677
Accr9g00921 319 MobiDBLite consensus disorder prediction 220 247 - -
Accr9g00921 319 FunFam Ethylene-responsive transcription factor 2 116 175 - -
Accr9g00921 319 CDD AP2 116 176 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr9g00921 Accr-Chr9 10800043 10801002 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr9g00921 16 319 AP2-EREBP Transcription Factor Family AT1G64380 50.000 6.36e-71 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Accr9g00921 AP2 4e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr9g00921 - - qsa:O6P43_024033 373.629