Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g00898 ATGACTGCGCATTCTATCAGATACACTCACCACACTAAACTCGTCTCGCCGGAGGAGCAACGCCGTCTGTGTGGAGGAATGGAGTATCCCAGAGTTGTTAGAATATGCGTGACAGACGGCGATGCGACGGATTCATCCAGCGACGAAGAAGGAGGGGCTGTCACGCGCCACCGTGGGAGGAGGTTCGTCAACGAGATTACGATAACCCAAAACGATGATGCTGCTAATAGGCCTGAGAGCCAGTGTCGGAAGAATAATAGGAGTAGAGGAATGGGAGGTCGGCGGGCGATGAAGGCATCGTCGGCGGGGAAGAAGTTCAGGGGAGTGAGACAGAGGCCGTGGGGGAAATGGGCGGCGGAGATCAGAGATCCTCTGCGACGTGTACGTTTGTGGTTGGGGACGTATGAAACTGCAGAGGAAGCTGCGATGGTGTACGATAAAGCAGCGATTGAGCTGAGGGGAGCAGAGGCACTGACCAATTTCATAACCCCACCGGGAAAGGATTGCGAGGAGGAGAGGAAATTGGGTTCCCCGAAATCTGTTCTCCAGTCTCAGAGTGGAAATCTGTTGGAGGAGGTTGAGTCTGTAACAACCAAAGATGATACGATCAGTGAATGTCGGGACGAATCACCTTCTTCCTCGTCAGCGTCAGGGGTACCGGAGAACTTATCAGAGTTTCCAGCCGATATATTCGACTTCCAAACATCGTTGCCGGACCTATTGGACGAGACGAATATTACAGAAAGCATCTACTCCGATGCGGCGTGGGTGAGTCCGACCGAGAACTTCGACCTGGGATTCGATTTCGAACCGGGTTTCGGATTCTCGAATTGGCGCAGAGATGACTATTTCCAAGATATCGGCGATTTGTTTGTTACAGATCCACTTGTTGCTCTTTGA 900 0.5211 MTAHSIRYTHHTKLVSPEEQRRLCGGMEYPRVVRICVTDGDATDSSSDEEGGAVTRHRGRRFVNEITITQNDDAANRPESQCRKNNRSRGMGGRRAMKASSAGKKFRGVRQRPWGKWAAEIRDPLRRVRLWLGTYETAEEAAMVYDKAAIELRGAEALTNFITPPGKDCEEERKLGSPKSVLQSQSGNLLEEVESVTTKDDTISECRDESPSSSSASGVPENLSEFPADIFDFQTSLPDLLDETNITESIYSDAAWVSPTENFDLGFDFEPGFGFSNWRRDDYFQDIGDLFVTDPLVAL 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g00898 299 MobiDBLite consensus disorder prediction 178 193 - -
Accr9g00898 299 Gene3D AP2/ERF domain 104 163 IPR036955 GO:0003700|GO:0006355
Accr9g00898 299 Pfam AP2 domain 105 154 IPR001471 GO:0003700|GO:0006355
Accr9g00898 299 FunFam Ethylene-responsive transcription factor 2 104 163 - -
Accr9g00898 299 CDD AP2 104 161 IPR001471 GO:0003700|GO:0006355
Accr9g00898 299 MobiDBLite consensus disorder prediction 74 105 - -
Accr9g00898 299 PRINTS Ethylene responsive element binding protein signature 128 144 IPR001471 GO:0003700|GO:0006355
Accr9g00898 299 PRINTS Ethylene responsive element binding protein signature 106 117 IPR001471 GO:0003700|GO:0006355
Accr9g00898 299 ProSiteProfiles AP2/ERF domain profile. 105 162 IPR001471 GO:0003700|GO:0006355
Accr9g00898 299 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 30 190 - -
Accr9g00898 299 SUPERFAMILY DNA-binding domain 105 161 IPR016177 GO:0003677
Accr9g00898 299 SMART rav1_2 105 168 IPR001471 GO:0003700|GO:0006355
Accr9g00898 299 MobiDBLite consensus disorder prediction 163 221 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr9g00898 Accr-Chr9 10602835 10603734 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr9g00898 1 299 AP2-EREBP Transcription Factor Family AT4G23750 36.620 5.56e-51 169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Accr9g00898 AP2 4.8e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr9g00898 - - pcin:129323193 458.759