Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g00843 ATGGGTCACCACTCATGCTGCAATCAACAGAAGGTAAAGAGAGGGCTCTGGTCTCCTGAGGAAGATGAGAAACTCATCAGATACATTACCACTCATGGCTATGGCTGTTGGAGTGAGGTCCCCGAGAAAGCTGGGCTGCAACGGTGCGGTAAGAGTTGTCGCCTCAGGTGGATTAATTATTTGAGGCCTGATATTAGAAGAGGCAGGTTTACTCCTGAAGAAGAGAAGTTAATTATAAGCCTTCATGGGGTCGTAGGCAACAGGTGGGCTCACATTGCAAGCCACTTGCCTGGAAGAACAGACAACGAGATAAAGAACTATTGGAATTCATGGATCAAAAAGAAAATAAGAAAGCCCTCTTCAGTTTCTTCAACCACAAATAATGCACAAAGCAGCATCATCGATCACCACCCATATAATTTCAATAATCCCAACCAATTAGACTTTTCAAACCAAGATAATCTAACCACAAAACCACCACCAATTCATCAACACCAAGACCCTACTACTTCTCTATTTTCTTCCACATGCCCCTTATTTATGTTTGACACTAGCTCTTTAGATGCTTCTTCTGCAACAACAACCACCACAATACTGGACAACAATAATGCAAGATTACCAGAAATGTTAATCCACCACCATCATCACCAGCAAGATGCTACTATGGGTTTAAGCTCAGAAACATGGAATAATCTCAGCCACCACCATCAGATTCAAGCTTTTCCTCCTCCTCCTCCATCGTCGGCTTCTTTCAGCGCGGCGGCTTCAGGCATGGTGGCTTCTAATTATCTGCCACCGTTGATAGAGAATGTGGACAACATGGTGCCGAATATTCATGAAGTGCAATCTTGCAGTATGGTGGATGAGGAAGGTGAAATGGCACTAGAGTGCTTGCAGAGGCATGAGTTGAACGAGTGGGTGGTGGACCATACAGTACAGCAACAATGTCCCAGCTTTATTTTTTGGGAAAACGTGGAAGGACAACTTGGCGGCGACGGTGGCGGCGAAGAAATTGCACCGAATTCTTCGAATTTGGCAACTACACTTTCTTCGTTTCCTTCCTCCTTATGA 1071 0.4463 MGHHSCCNQQKVKRGLWSPEEDEKLIRYITTHGYGCWSEVPEKAGLQRCGKSCRLRWINYLRPDIRRGRFTPEEEKLIISLHGVVGNRWAHIASHLPGRTDNEIKNYWNSWIKKKIRKPSSVSSTTNNAQSSIIDHHPYNFNNPNQLDFSNQDNLTTKPPPIHQHQDPTTSLFSSTCPLFMFDTSSLDASSATTTTTILDNNNARLPEMLIHHHHHQQDATMGLSSETWNNLSHHHQIQAFPPPPPSSASFSAAASGMVASNYLPPLIENVDNMVPNIHEVQSCSMVDEEGEMALECLQRHELNEWVVDHTVQQQCPSFIFWENVEGQLGGDGGGEEIAPNSSNLATTLSSFPSSL 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g00843 356 CDD SANT 69 112 IPR001005 -
Accr9g00843 356 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Accr9g00843 356 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Accr9g00843 356 Gene3D - 6 66 - -
Accr9g00843 356 FunFam MYB transcription factor 6 66 - -
Accr9g00843 356 CDD SANT 17 61 IPR001005 -
Accr9g00843 356 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Accr9g00843 356 SMART sant 66 114 IPR001005 -
Accr9g00843 356 SMART sant 13 63 IPR001005 -
Accr9g00843 356 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Accr9g00843 356 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Accr9g00843 356 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Accr9g00843 356 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Accr9g00843 356 PANTHER MYB DOMAIN PROTEIN 55 1 273 - -
Accr9g00843 356 Gene3D - 69 136 - -
Accr9g00843 356 FunFam Transcription factor MYB26 68 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr9g00843 Accr-Chr9 9861313 9863269 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr9g00843 1 331 MYB Transcription Factor Family AT1G63910 50.829 1.32e-101 302
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Accr9g00843 Myb_DNA-binding 5.7e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr9g00843 K09422 K02947 gmx:100803556 435.261