Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g00826 ATGTCTACAAATGCCTACGCTTTTGATTCTTCTTTTCCCAGACATTCGACCACATCGGACATGGCTTCCTCCGACACACCTGGCGGCGGCGACCTTTTCTTCTCCGACCCTTTTCCTTTCCTTTTCTTCAACCCCACCGACGTGGCCGCCGTTCATCAGATTCCAAACGAAACCGCTTCTTCTTGTTCTCTTGACCCTTTTTCCTCTTCCTTCTTTTCCTTTTCTCCTCCAAGTACCCACCTGGAAAATCTCAGCCTTTATCAGCAGCATCTAGAAACAGAGTTCGGAAATTTCTCTGGTCTTGATGATGGGTTCAAAGTAGTGAAGAGTGAAGAATTACAAACGGGTGGTGATTACAGCAACGGAAATCAGAACTTTGTTCCTCAAAATAATGCTTCTGAAAATGTACACAAGTCCATTCAAAGGAGCTACAGTAGTAGCTGTTTTGATGGGAAACCTGGTTTTCTGTTGCAACCTCACCATGATACTCTCATAGATTCCTCAAACTTTCATGGCCAGGCCATGAATTCTCCTGAGAACAGTCAAGTAAGAAGAGTGTGCAGTACAGGAGACTTGCAGAACATGGAATCATCAACTCAAACGAACCAGAGGGAAGGGTCGTTCTTAGAGGAAGCAAACTTCAAAGTAGGCCGTTACAGTGCCGAAGAAAGAAAAGAGAAAATCTCTAAGTACAGAGCCAAGCGAAGCCAGAGGAACTTCAACAAGACCATCAAGTATGCATGCCGGAAAACACTGGCGGATAATCGGCCACGCATACGTGGCAGATTTGCACGAAACGATGAGACGGGCGAGAATTCCAAGGGTTCATGTTCAACCAGAAACGAAGAAGAAGACGAGTTCTGGTTTGAAGGAATGCATGAAGAACAGGAGCAGATGATGACGTGGAGGATGATGAGTGGAGGAGGAGAATACATGAACAGTTATGGATCAGATCCTCTTCATCAACATCAGTTCCAATACCGTAGCTTTTAA 993 0.4512 MSTNAYAFDSSFPRHSTTSDMASSDTPGGGDLFFSDPFPFLFFNPTDVAAVHQIPNETASSCSLDPFSSSFFSFSPPSTHLENLSLYQQHLETEFGNFSGLDDGFKVVKSEELQTGGDYSNGNQNFVPQNNASENVHKSIQRSYSSSCFDGKPGFLLQPHHDTLIDSSNFHGQAMNSPENSQVRRVCSTGDLQNMESSTQTNQREGSFLEEANFKVGRYSAEERKEKISKYRAKRSQRNFNKTIKYACRKTLADNRPRIRGRFARNDETGENSKGSCSTRNEEEDEFWFEGMHEEQEQMMTWRMMSGGGEYMNSYGSDPLHQHQFQYRSF 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g00826 330 Pfam CCT motif 224 266 IPR010402 GO:0005515
Accr9g00826 330 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 65 285 IPR045281 GO:0009909
Accr9g00826 330 MobiDBLite consensus disorder prediction 1 25 - -
Accr9g00826 330 ProSiteProfiles CCT domain profile. 224 266 IPR010402 GO:0005515
Accr9g00826 330 MobiDBLite consensus disorder prediction 262 284 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr9g00826 Accr-Chr9 9657073 9658551 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr9g00826 220 272 C2C2-CO-like Transcription Factor Family AT5G24930 49.057 9.11e-11 60.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Accr9g00826 CCT 5.4e-18 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr9g00826 - - pcin:129284634 436.032