Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g00822 ATGGCACGATGGTCAGGTTTCACAAACGGATCTTCGGAAGATTGCCTTGAAACTGTTGGAGGACATCAGGCTAATGATTGTTGCCTCAATGTTGCTCACGTTGTTAGAGATCAACTTGATGATGAAGTTAAACTAGAGTGCTTGTTTCATCAACTTCTATCAATTTATATCAAGGAGAAGAATTCTAGGGGCATTGTTCGTCCTCTTCCTGTAATGATTGGTGATGGTCAATCGTTGGATTTATACAAACTGTTCTTCTCTGTGAAGGAAAGAGGTGGTTATGCTGTGGTGTCGGAGAAAGGATTGTGGGGTCTTGTGACCAAGGAATTGGGTTTGAACCCTCAAATTTTGGCTTCGGTGAAATTGGTGTATGGCAAGTATTTGAATGAGTTTGAAAGATGGCTCAGCAAAGCTCGTGGAGGAAAGAATTTCAAAAGTGGGAATCATGAGTGTAATATAGATTTCAAGTCAGTGCCGCCAGAGCTAGCAGAAGAGTTTAGAGACTTATTATCCCGCGACGGCGAGTTGAAAGATGATGTATCTGTTCAGCTGCTATCATGTAAAATGAGAAGCAACATTGACCTGATTAATCACGAGAGTGAGATGAATTTATTGGACAAAAAAAATCAACCTCCTATATGCGAGAATGTCCACAGTATCCTTGGTGATGTTGACTTGAAATTTTGTGATAGTGTTGAGGATGATCTTGTTAGCATGAACTCAGAAGTTTCTGTGAAGGAATTTAGTTCTCGCAAGCGCAAACGAGAAGCATTTTCTTCAATGCTGAACTGGATCAGAAAAATTGCAAAGCATCCTCGTGATCCTTCAATTGAAGAGATACCAGAAGCTTCTAAGTGGAAGGAGTATAAAGGACAAGATTTTTGGGTTCAGATACTTAGAGCAAGAGAGGCACTGCAGCTGAAATCTTGCGACAAACCAAACTGTGGGCAGTCTCCTTTACAGAAGCAAAAGATGCATCCCGCCTTGTATGAGGATCATGTTGCTGTCAGTCACCATTCTACGGCAAAACTGAGATGGAGCAAAAGGCTGCCTACCTCAATTAAATCTCAAATATGCTCTTGTTGCGATTCACGTTCAGCTATTGAAAACAAGTTACCCTGTTCAGTCACCGAGGAAGAAAATGCTTCACTAGAGAAAAAAACTGCAGCAGATGGTTCGTTGAATGCAAAGGAAAGAGCTAACCCGTCCGCAGATGATACAGTAAAAAAAGTAGTAGCTATAGGTCCTCTTTTTCAAGCTGAAGTGCCAAAATGGACTGGTGTAGTTTCTGAAAGCGATTCTAAATGGTTGGGCACACAAGTATGGCCTTTGAAGGATAGGGAACCACAACCTTTTAGCGACACCGATATTATTGGGAGAGGAAGACAAGAGACTTGTGGCTGTCAAGTTCAAGGTTCTGTTGAATGTGTTAGGTTTCATATTGCTGAGAAGAGGATGAAGTTGAAGCTTGACTTGGGTTTAGCATTTTACCTTTGGGGATTTGATCGTATGGGGGAGGAAGTTTCACTTCAATGGACTCCCGAACAAGAAAAGAAATTCAAAAATATTATGTCAAACCTGCCCTCCCAAAATAAGAGCAAGCAGTTCAAGTATTTTCCAAAGAAGACGAGGAAAAGCTTGATTTGTTATTACTTCAATGTATTTCTTATTCAACGAAGGATTTATCAGAATCGTGTGACTCCAAATAATGTTGATAGTGATGATGACGAACATGAATTTGGATCTTTTACCGACGGCTTCGGGATGGAAGCTTTAAAGGGTCCAGGTTATAAGTTTCTGGAGTGTTCACTGAACAACCGATGCACTGAATTGGAGTGA 1839 0.4089 MARWSGFTNGSSEDCLETVGGHQANDCCLNVAHVVRDQLDDEVKLECLFHQLLSIYIKEKNSRGIVRPLPVMIGDGQSLDLYKLFFSVKERGGYAVVSEKGLWGLVTKELGLNPQILASVKLVYGKYLNEFERWLSKARGGKNFKSGNHECNIDFKSVPPELAEEFRDLLSRDGELKDDVSVQLLSCKMRSNIDLINHESEMNLLDKKNQPPICENVHSILGDVDLKFCDSVEDDLVSMNSEVSVKEFSSRKRKREAFSSMLNWIRKIAKHPRDPSIEEIPEASKWKEYKGQDFWVQILRAREALQLKSCDKPNCGQSPLQKQKMHPALYEDHVAVSHHSTAKLRWSKRLPTSIKSQICSCCDSRSAIENKLPCSVTEEENASLEKKTAADGSLNAKERANPSADDTVKKVVAIGPLFQAEVPKWTGVVSESDSKWLGTQVWPLKDREPQPFSDTDIIGRGRQETCGCQVQGSVECVRFHIAEKRMKLKLDLGLAFYLWGFDRMGEEVSLQWTPEQEKKFKNIMSNLPSQNKSKQFKYFPKKTRKSLICYYFNVFLIQRRIYQNRVTPNNVDSDDDEHEFGSFTDGFGMEALKGPGYKFLECSLNNRCTELE 612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g00822 612 Gene3D - 33 144 IPR036431 GO:0003677
Accr9g00822 612 SMART ARID_2 40 132 - -
Accr9g00822 612 CDD ARID 62 132 - -
Accr9g00822 612 SMART bright_3 44 137 IPR001606 GO:0003677
Accr9g00822 612 SUPERFAMILY ARID-like 38 140 IPR036431 GO:0003677
Accr9g00822 612 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 2 40 590 - -
Accr9g00822 612 Pfam ARID/BRIGHT DNA binding domain 49 132 IPR001606 GO:0003677
Accr9g00822 612 ProSiteProfiles ARID domain profile. 43 136 IPR001606 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr9g00822 Accr-Chr9 9576429 9580429 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR ARID Accr9g00822 ARID 4.2e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr9g00822 - - gmx:100819320 667.151