Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g00810 ATGGTACCAGAGAACCTGAAGAAACAACTCGCCTTGGCTGTGAGAAGCATCCAATGGAGCTACGCAATCTATTGGTCTGGTTCACCTGAAAACCCCGGGGTTTTCGAGTGGGGTGAAGGATATTACAATGGGGACATAAAGACGAGGAAAACAAGCCAAGCAGGAGAATTTAATTCAGACCAAATAGGTTTACGAAGGAGTGAGCAACTCAGAGATCTCTATGAGTCTCTTGCAACTGCAGAATCAAGTCCACAAGCTAAAAGGCCTTCAGCTTCACTATCACCTGAGGATCTCACTGATACAGAATGGTATTATTTGGTGTGCATGTCATTTGTATTCAACATTGGCCAAGGGTTGCCTGGAAGAACTCTGGCGAAAGGTCAACTTATTTGGCTGTATAATGCCCATTTGGCTGATAGTAGAATTTTTAGTCGTTCTCTTCTGGCAAAGAGTGCATCCATTCAGACAGTGGTATGCTTCCCCTTTCTGGATGGTGTCCTTGAGCTAGGCACAATCGATCCAGTTTCAGAGGACCTCGGTCTCATTCAACGCATGAGAACTTCTTACTTGGACATTTTAGATGCCAAAGTTCGCAAGGACTCTCTAGTTGCATTTAATACAGGAGATGGCGAAGAAATTGCCGGTGCAGTATTTGATCATGACGCGTTTGATGTAAAATTGACTCCTGAATCAGAATATGACTTGGCCAATGCAATTTCTCCCAGTAATAGTTCAAATGAGTTCCATGCCAATAAACAAGCAGATGAGAGATTCATGGTTGAAAGAATAAATGGTGTTGCTTCCCATGTCCAAAGCTGGCAAGTAATGGAGGATGAGTTGAGTAATTGTGCCCATACTTCCATGAATACTAGTGACTGTATATCTCACAGTATTGCTGGTTCTGAAAAGAATGCTTCAGTTCCCAAGGTGGATCATTGTGGGCAAGATGTTCAAGAGGGTCAAAACACAAGAATGACCATGGTAGATGCTCAGAGTGATGATTGGCATTATCAAAATGTTCTTTCTTCTCTTCTTAAAAGCTCGGACCAATTAATTATGGGAGCACATTTTCAAAACTTCCATTGTGAATCCGGTTTTGTCAGTTGGAAGAGAGAAAGATCAATGGGTCAATGGCCAAGAGGGGGAGCTCACCAAAAAATATTGAAGAAGATATTGTTTGAAGTTCCACGTATGCACACGGATATGTTGCTTGAGGCTCGAGAAGAAAATGACTATAAAGAGGAAATGAGACCTGAAGCTGATGAAATTGGCTTGAACCATGTACTGTCTGAAAGAAAGAGAAGGGCAAAACTAAATGAAAGGTTTTTAACCCTTAAATCAATGGTTCCTTTGATTACTAGGGATGACAAAGTTTCGATACTAGATGAGGCAATAAAACACCTTAAAAAGCTGGAGAAAAAGGTGAGAGAGTTGGAAGCTCGCCGGGAGTCCAAAGATTCCGAGGCTAGAATTAAAAGAGCACCTCAAGATGTTGTGGAAAGGACTTGTGATAATTATTGTAACAACAGAGCTGATAATAGCAAGAAGCCAGCGACGAACAAAAGGAAGGCTTGTGACATTGATGAGACAGAGACAGAGATTGATTCTGTTCGTCTAAAAGATATTTCTAATAACGTTACTATCTGCATGAACGACAACAAGGTTTTGATTGAATTGAAGTGTCCTTGGAGGGAAGGAGTTCTACTAGAAATAATGGAAGCAGTCAGCAATCTTCATTTAGATTTTCATTCAGTTCATTCATCAGAAGCTGATGGGACTCTCTATTTAACCATGAAATCCAAGATCAGAGGAGCAGCTCTTAACTCAACAAAAAATATCAAACAAGCACTCCTCAAGGCAGCTTGGAAGTGTTGA 1875 0.4112 MVPENLKKQLALAVRSIQWSYAIYWSGSPENPGVFEWGEGYYNGDIKTRKTSQAGEFNSDQIGLRRSEQLRDLYESLATAESSPQAKRPSASLSPEDLTDTEWYYLVCMSFVFNIGQGLPGRTLAKGQLIWLYNAHLADSRIFSRSLLAKSASIQTVVCFPFLDGVLELGTIDPVSEDLGLIQRMRTSYLDILDAKVRKDSLVAFNTGDGEEIAGAVFDHDAFDVKLTPESEYDLANAISPSNSSNEFHANKQADERFMVERINGVASHVQSWQVMEDELSNCAHTSMNTSDCISHSIAGSEKNASVPKVDHCGQDVQEGQNTRMTMVDAQSDDWHYQNVLSSLLKSSDQLIMGAHFQNFHCESGFVSWKRERSMGQWPRGGAHQKILKKILFEVPRMHTDMLLEAREENDYKEEMRPEADEIGLNHVLSERKRRAKLNERFLTLKSMVPLITRDDKVSILDEAIKHLKKLEKKVRELEARRESKDSEARIKRAPQDVVERTCDNYCNNRADNSKKPATNKRKACDIDETETEIDSVRLKDISNNVTICMNDNKVLIELKCPWREGVLLEIMEAVSNLHLDFHSVHSSEADGTLYLTMKSKIRGAALNSTKNIKQALLKAAWKC 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g00810 624 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 422 471 IPR011598 GO:0046983
Accr9g00810 624 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 425 484 IPR036638 GO:0046983
Accr9g00810 624 PANTHER TRANSCRIPTION FACTOR TT8 2 619 - -
Accr9g00810 624 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 6 188 IPR025610 -
Accr9g00810 624 Gene3D - 422 484 IPR036638 GO:0046983
Accr9g00810 624 SMART finulus 428 477 IPR011598 GO:0046983
Accr9g00810 624 Coils Coil 461 488 - -
Accr9g00810 624 Pfam Helix-loop-helix DNA-binding domain 426 472 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr9g00810 Accr-Chr9 9449490 9452665 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr9g00810 2 624 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G41315 47.561 0.0 548
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Accr9g00810 bHLH-MYC_N 4.8e-48 CL0161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr9g00810 - - gmx:100808167 761.14