Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g00796 ATGGATGGGAGAGAAGCTATGGCATTCTCTGGAGGCCCTCCTTCATATTACATGCATAGAGGAGGCATAGTTGGGTCTGTCCCTGTAACACATTCTGGAGGGTTTCCTCCTGGGTTCAGACCAAACACCGGCATTCCAGCAGAGTCAAATGTACGAGGTAGCTCTATGGGTTCTACAGTTACAGTAGAACCTGTTCGTGCCGATTATAGTCATATCCATGGCATGAGCATTAGTTCGCCTCCTGGAGTACCTCCTTCAAGCGAGCGTGTGAAAAAGAAACGAGGAAGGCCTCGTAAATACCGTCCTGATGGACCTATTTCTCTGGGTTTGTCTCCCGTGCCTGCCACTGCAAATTCTACCCCTGCAGGCCCTGCTTCGAGCACTCCATCCCAGAGACGAGTTAGAGGGCGCCCACCTGGAAGTGGAAGGAAACAAAAACTAGCCTCGCTGGGTGAATGGATGAACAGTTCTGCAGGGATGGCTTTTGCACCTCATGTTATCACAATTGGAGCTGGGGAGGACATTGCAGCGAAGTTATTGTCCATTTCACAACAGAGACCCAGGGTGCTGTGCATCTTGTCAGGTACCGGGACAGTTTCATCAATTACTCTGCGGCAGCCTGCTTCTAGTGTTGTCAGCATCACTTTTGAGGGCCGATTCCAAATATTACGCTTGTCTGGTTCTTACCTGGTTGCCGAAGATGGTGGACACCGTAGTAGAACAGGTGGCTTGAGTGTTTCCCTTGCTAGTCCTGATGGTCATGTTATTGGTGGTGCGGTTGCTGTGCTTATTGCTGCAAGCCAAGTGCAGGTGGTAGTATGCAGCTTTATATATGAAGGGTCCAAGACCAAGACTAAGCCATTGAGTGCCCTGGAGGGCGATGTTTCTGAAGCTGAGCATGGTAACAAGTTAGCTACTCCGGCAAGTGCTCCCCCGTCTCAGAACTACAGTCAACCGACAAGAGGCATTTGGCAATCCGATCTAAAAAATCCATCATCATTTTCGGGGTTAATCGACTGTCTGGTATGA 1029 0.4976 MDGREAMAFSGGPPSYYMHRGGIVGSVPVTHSGGFPPGFRPNTGIPAESNVRGSSMGSTVTVEPVRADYSHIHGMSISSPPGVPPSSERVKKKRGRPRKYRPDGPISLGLSPVPATANSTPAGPASSTPSQRRVRGRPPGSGRKQKLASLGEWMNSSAGMAFAPHVITIGAGEDIAAKLLSISQQRPRVLCILSGTGTVSSITLRQPASSVVSITFEGRFQILRLSGSYLVAEDGGHRSRTGGLSVSLASPDGHVIGGAVAVLIAASQVQVVVCSFIYEGSKTKTKPLSALEGDVSEAEHGNKLATPASAPPSQNYSQPTRGIWQSDLKNPSSFSGLIDCLV 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g00796 342 CDD DUF296 164 276 IPR005175 -
Accr9g00796 342 MobiDBLite consensus disorder prediction 297 322 - -
Accr9g00796 342 MobiDBLite consensus disorder prediction 307 322 - -
Accr9g00796 342 MobiDBLite consensus disorder prediction 112 134 - -
Accr9g00796 342 SUPERFAMILY AF0104/ALDC/Ptd012-like 161 278 - -
Accr9g00796 342 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 68 312 IPR039605 GO:0003680
Accr9g00796 342 MobiDBLite consensus disorder prediction 72 146 - -
Accr9g00796 342 Gene3D - 164 293 - -
Accr9g00796 342 Pfam Plants and Prokaryotes Conserved (PCC) domain 164 276 IPR005175 -
Accr9g00796 342 ProSiteProfiles PPC domain profile profile. 157 297 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr9g00796 Accr-Chr9 9282447 9285385 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr9g00796 1 278 AT-hook Motif Nuclear Localized (AHL) Family AT1G63470 55.442 1.18e-96 290
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr9g00796 - - qsa:O6P43_034235 402.905