Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g00791 ATGGCATCTAAGCTCTTAGCTTTGACCTGCATCCGCAGTGAAGGGCGGATCCAGCCATGGACTCGGCCTCGTTACCCGTCGATGCCGACGTACCCAAAGGGCGTGATGGCAGAAGAGGGCAGCAGCAGCATGGAGGCCGGGTCAGAAGCCAAGGCTCTTTTCTCCGTCGTCGGAATGACATGCTCGGCCTGCGCCGGCTCCGTCGAGAAAGGGATCAAACGCCTACCCGGAATCCGTGAGGCCGTAGTGGATGTTCTCAATAATCGAGCTATGGTTCTGTTCCACCCCTCCTTCGTTAACGACGAGACTATTCGCGAGGCCATTGAAGATGCTGGGTTTGAAGCTACATTATTTAGAGATGAGATGAATGAGAGATCCATTCAAGTATGTCGCATAACCGTAACTGGAATGACTTGCACTTCTTGCTCCTCCACTGTTGAATCTGCTCTACAAGCAATTCCAGGCGTGCTGAAAGCTCAAGTGGCTTTAGCGACTTGCGAAGCGGAAGTACACTACAATCCAAACATTGTCAACCACAATCAAATTCTGGAAGCCATAGAAGACACTGGATTTGAAGCCACACTTATCAGTTCAGGTGAAGATATAAACAAGGTAGAGCTCCAAGTTGACGGTGTACGAACTGAACATTCCATGAGAGTCATTGAAACTTCTCTTAAAGCTCTTCCAGGGGTCCAGGATATAGAATTATATCCTGAGCTGAATAAGATATCAGTTTCTTTCAAACCAGACGTGACAGGACCTAGGAATTTTATCAAAGTAACTGAAAAAATTGGGTCCAGGCGTTTCAAGGCTAAATTATTTTCTCAGCAAGGAGAACGAAGAGATACTCTACAAGGGAAGGAAATTAAACAATATTATAGATCCTTCTTATGGAGTTTGGTTTTTACTGTTCCAGTCTTTTTAACCTCTATGGTTCTTATGTATATCCCGGGAATTAAGCATGGACTAGATACCAAAGTTGTCAATATGCTTACAGTGGGACAGATTATAAGATGGGTACTTTCCACACCAGTACAGTTCATAATAGGCCGAAGATTCTACTCTGGATCTTACAAAGCATTACGCCATGGTTCTGCCAACATGGACGTCTTGATTGCCTTGGGAACAAATGCAGCATATTTCTACTCAGTGTACTCGGTACTGAGAGCTGCTAGCTCCCCACACTTCGAGGGGACTGATTTCTTTGAGACTAGCGCAATGCTTATTTCATTTATTCTGCTGGGAAAGTATCTTGAAGTCTTCACCAAGGGGAAGACATCTAATGCTATCGCGAAGCTCATGAACTTGACCCCCGATACAGCTATATTGTTGACACTGGACGATGAGGGGAATGTGGCTAATGAAGAAGAGATTGACAGTCGATTGATTCAAAAGAATGATCTGATTAAAATTATTCCCGGTGCAAAAGTAGCTTCTGATGGATTTGTTGTCTGGGGCCAAAGCCACGTGAATGAGAGTATGATAACTGGGGAGGCACGTCCTGTTGCGAAGAGGAAGGGTGATCCTGTTATTGGAGGAACTGTGAATGAGAATGGAGTGTTGCATGTCAGGGCAACAAGAGTTGGATCAGAGAGTGCTCTTTCACAGATTGTTCGACTGGTTGAGTCTGCTCAGTTGGCCAAGGCTCCTGTGCAGAAGTTTGCTGATCGCATTTCAAAATTCTTTGTGCCTTTGGTCATTTTAATCTCTTTCACCACTTTTCTTGCATGGTTCTTTGCCGGAAGGTTCCATGCTTACCCGAAATCGTGGATACCATCTTCCATGGATAGTTTTGAGCTTGCTTTACAGTTTGGCATCTCTGTCATGGTCATAGCTTGCCCTTGTGCTCTAGGTCTAGCCACACCAACTGCTGTTATGGTTGGCACAGGAGTTGGTGCATCTCAGGGCGTACTAATCAAAGGAGGGCAAGCATTAGAAAGTACACATAAGGTGCAATGCATTGTCTTCGACAAGACTGGTACTCTCACCATTGGGAAGCCTGTGGTTGTAAACACTAAACTATTGATTAATATGGTCCTCCAAGAGTTCTATGAACTTGTAGCAGGACTTGAGGTGAATAGTGAGCATCCATTGGCCAAGGCAATTGTTGAGTATGCCAAGAAATTTAAAGAAGAAGAGAACCCTGCTTGGCCTGAAGCACGAGATTTTGTCTCCATACCTGGCCATGGAGTGAAGGCCATTGTTCGAAACAAGGAAATAATTGTGGGTAACAAGAGCTTGTTGGCTGACCATAATATTGCAGTTCCAGCGGAGGCAGAAGATATACTGGCTGAGGCTGAGGGGATGGCTCAAACTGGAATTTTGGTATCGATTAATGGGGAAGTGGCTGGAGTGGTAGCAGTATCTGATCCATTGAAACCAGGTGCTCAAGAAGTGATCTCAATTCTCAAGTCCATGAACATCAAAAGCATCGTAGTAACTGGTGACAACCGGGGAACTGCTAATTCTATAGCAAGGGAAGTTGGGATTGATGAAGTCTTTGCTGAAACTAAACCAGAGCAGAAAGCAGAGAAGGTGAAGGAGTTGCAGGCTGCTGGATATACAGTGGCAATGGTTGGGGATGGTATCAATGATTCACCAGCACTTGTAGCAGCAAATGTGGGAATGGCAATTGGTGCAGGCACAGACATAGCTATTGAGGCAGCTGACATTGTTCTGATGAAGAGCAACTTGGAGGATGTGATAACTGCCATTGATCTTTCCAGAAGAACATTTTTCCATATCCGTCTCAATTACATTTGGGCTTTGGGTTACAACCTTCTTGGCATTCCAATCGCTGCCGGAGTTCTTTTCCCTCTCACAGGATTCCGATTGCCTCCTTGGATTGCCGGGGCCGCAATGGCAGCCTCATCTGTGAGTGTTGTTTGCTGCTCTCTATTGCTGAAATATTACAGGAGGCCTAAGAAACTGGACAAGCTTGAGATTCGGGGCATTAGCATAGAATGA 2967 0.4537 MASKLLALTCIRSEGRIQPWTRPRYPSMPTYPKGVMAEEGSSSMEAGSEAKALFSVVGMTCSACAGSVEKGIKRLPGIREAVVDVLNNRAMVLFHPSFVNDETIREAIEDAGFEATLFRDEMNERSIQVCRITVTGMTCTSCSSTVESALQAIPGVLKAQVALATCEAEVHYNPNIVNHNQILEAIEDTGFEATLISSGEDINKVELQVDGVRTEHSMRVIETSLKALPGVQDIELYPELNKISVSFKPDVTGPRNFIKVTEKIGSRRFKAKLFSQQGERRDTLQGKEIKQYYRSFLWSLVFTVPVFLTSMVLMYIPGIKHGLDTKVVNMLTVGQIIRWVLSTPVQFIIGRRFYSGSYKALRHGSANMDVLIALGTNAAYFYSVYSVLRAASSPHFEGTDFFETSAMLISFILLGKYLEVFTKGKTSNAIAKLMNLTPDTAILLTLDDEGNVANEEEIDSRLIQKNDLIKIIPGAKVASDGFVVWGQSHVNESMITGEARPVAKRKGDPVIGGTVNENGVLHVRATRVGSESALSQIVRLVESAQLAKAPVQKFADRISKFFVPLVILISFTTFLAWFFAGRFHAYPKSWIPSSMDSFELALQFGISVMVIACPCALGLATPTAVMVGTGVGASQGVLIKGGQALESTHKVQCIVFDKTGTLTIGKPVVVNTKLLINMVLQEFYELVAGLEVNSEHPLAKAIVEYAKKFKEEENPAWPEARDFVSIPGHGVKAIVRNKEIIVGNKSLLADHNIAVPAEAEDILAEAEGMAQTGILVSINGEVAGVVAVSDPLKPGAQEVISILKSMNIKSIVVTGDNRGTANSIAREVGIDEVFAETKPEQKAEKVKELQAAGYTVAMVGDGINDSPALVAANVGMAIGAGTDIAIEAADIVLMKSNLEDVITAIDLSRRTFFHIRLNYIWALGYNLLGIPIAAGVLFPLTGFRLPPWIAGAAMAASSVSVVCCSLLLKYYRRPKKLDKLEIRGISIE 988
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g00791 988 PRINTS Copper-transporting ATPase 1 signature 77 100 - -
Accr9g00791 988 PRINTS Copper-transporting ATPase 1 signature 51 76 - -
Accr9g00791 988 PRINTS Copper-transporting ATPase 1 signature 106 126 - -
Accr9g00791 988 PRINTS Copper-transporting ATPase 1 signature 152 173 - -
Accr9g00791 988 NCBIfam copper ion binding protein 53 115 IPR006122 GO:0005507
Accr9g00791 988 NCBIfam copper ion binding protein 132 193 IPR006122 GO:0005507
Accr9g00791 988 SFLD C1.7: P-type atpase like 637 911 - -
Accr9g00791 988 CDD P-type_ATPase_Cu-like 294 969 - -
Accr9g00791 988 Pfam haloacid dehalogenase-like hydrolase 652 873 - -
Accr9g00791 988 ProSitePatterns E1-E2 ATPases phosphorylation site. 657 663 IPR018303 -
Accr9g00791 988 ProSitePatterns Heavy-metal-associated domain. 134 163 IPR017969 GO:0046872
Accr9g00791 988 Gene3D - 662 739 IPR023299 GO:0000166
Accr9g00791 988 Gene3D - 740 790 IPR023299 GO:0000166
Accr9g00791 988 FunFam Copper-transporting ATPase HMA5 127 198 - -
Accr9g00791 988 SUPERFAMILY HMA, heavy metal-associated domain 199 266 IPR036163 GO:0046872
Accr9g00791 988 ProSitePatterns Heavy-metal-associated domain. 56 85 IPR017969 GO:0046872
Accr9g00791 988 SUPERFAMILY HAD-like 654 965 IPR036412 -
Accr9g00791 988 SUPERFAMILY HMA, heavy metal-associated domain 48 119 IPR036163 GO:0046872
Accr9g00791 988 Gene3D - 423 545 - -
Accr9g00791 988 SUPERFAMILY Calcium ATPase, transmembrane domain M 400 647 IPR023298 -
Accr9g00791 988 PRINTS P-type cation-transporting ATPase superfamily signature 655 669 - -
Accr9g00791 988 PRINTS P-type cation-transporting ATPase superfamily signature 882 894 - -
Accr9g00791 988 PRINTS P-type cation-transporting ATPase superfamily signature 806 816 - -
Accr9g00791 988 PRINTS P-type cation-transporting ATPase superfamily signature 859 878 - -
Accr9g00791 988 PRINTS P-type cation-transporting ATPase superfamily signature 784 795 - -
Accr9g00791 988 PRINTS P-type cation-transporting ATPase superfamily signature 491 505 - -
Accr9g00791 988 Pfam Heavy-metal-associated domain 132 192 IPR006121 GO:0046872
Accr9g00791 988 Pfam Heavy-metal-associated domain 54 114 IPR006121 GO:0046872
Accr9g00791 988 Gene3D - 128 200 - -
Accr9g00791 988 Gene3D - 46 117 - -
Accr9g00791 988 FunFam Copper-transporting ATPase HMA5 49 120 - -
Accr9g00791 988 SFLD p-type atpase 637 911 IPR044492 -
Accr9g00791 988 SUPERFAMILY HMA, heavy metal-associated domain 126 199 IPR036163 GO:0046872
Accr9g00791 988 SUPERFAMILY Calcium ATPase, transduction domain A 455 541 IPR008250 -
Accr9g00791 988 ProSiteProfiles Heavy-metal-associated domain profile. 50 116 IPR006121 GO:0046872
Accr9g00791 988 Pfam E1-E2 ATPase 454 633 - -
Accr9g00791 988 ProSiteProfiles Heavy-metal-associated domain profile. 128 194 IPR006121 GO:0046872
Accr9g00791 988 PANTHER P-TYPE CATION-TRANSPORTING ATPASE 1 984 - -
Accr9g00791 988 CDD HMA 206 265 IPR006121 GO:0046872
Accr9g00791 988 FunFam Probable copper-transporting ATPase HMA5 767 916 - -
Accr9g00791 988 CDD HMA 132 194 IPR006121 GO:0046872
Accr9g00791 988 NCBIfam HAD-IC family P-type ATPase 408 938 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Accr9g00791 988 Gene3D - 202 276 - -
Accr9g00791 988 ProSiteProfiles Heavy-metal-associated domain profile. 203 269 IPR006121 GO:0046872
Accr9g00791 988 CDD HMA 54 116 IPR006121 GO:0046872
Accr9g00791 988 FunFam Copper-transporting ATPase 1, putative 423 545 - -
Accr9g00791 988 Gene3D - 622 916 IPR023214 -
Accr9g00791 988 NCBIfam heavy metal translocating P-type ATPase 368 968 IPR027256 GO:0006812|GO:0016020|GO:0019829
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr9g00791 Accr-Chr9 9260159 9269228 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr9g00791 1 988 Primary Pumps ATPases AT1G63440 75.050 0.0 1512
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr9g00791 K17686 - qsa:O6P43_034232 1593.94