Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g00788 ATGAAGTTATTTGCTTCACTGTTGTTTCTCAGTCTAATTTCCATGGTCTCTTTTGCGAATTGTGATACTGTACCCTTAAAGGAAGTTTGGGCGCTCACAGCCTTTAAAGAAGCTGTATATGAAGACCCGTACCTGGTTCTTTCCAACTGGAATACGTTGGATTCAGTTCCCTGTGAATGGTTTGGCGTTTCTTGCACTAAAGACCGTGATCATATCATTAAGCTAAATATTTCGGGGTCTTCATTAAGAGGATTTCTAGCGCCAGAATTGGGAGAAATCACCTACTTGCAAGAACTGATTTTGCATGACAACAATCTGATTGGAACAATACCTAAAGAACTGTTCATGTTGAATTCCCTCAAAGTCTTGGATTTGGGGAAGAATCTATTATCTGGACCAATTCCTCCAGAGATTGGGAATCTAGCTCAAGTTGTTAAAATAAACCTGCAGTCCAATGGGTTGACTGGTAGGCTACCTCCTGCACTTGGAAATTTGAGGTGCCTTCAAGAACTTAGGCTGGACAGGAATAAACTTCAAGGACTAGTTCCTGCTCGTGGCAGTTCAAGCTTTCCTACAAATATGCGTGGAATGTATCCTTCAATTGCAAATTTAACTGGTCTCTGTCGATTACCTCAGTTACAAGTTGCAGATTTATCATATAACTTCTTTGTAGGTGGCATACCCGCTTGCTTGAAGTATCTGCCTAGGTCTAGCTTTCAAGGGAACTGCTTCCAAAGTAAAGAATTAAAGCAGCGTTCTTCAGTGCAATGTGCTGGTGCTTCACCTGCCAAGAGCCGTTCTGTGGCCAATTCAAAGCAGCCACCTGCTGGATATGTTGTGTCCAAGCATCATAGAGCATCCCAACCTACCTGGCTGTTGGCTCTAGAAATAGCGACAGGAACCTTGGTTGGCTCCATCTTTCTGGTTGCAATGCTCGCTGCACTTCTTAAATGGGACAACAAATCATCTATCATTTGGCCTTGGAAGAAATATGCGAGCCGGAAGGACCATATGACTGTATATATAGGCTCTGAGATACTGAAGGATGTGAGGAGTTTCAGCAGACAAGAACTTGAAGTGGCATGTGAAGACTTCAGCAACATTATTGGGTCCTCACCCGATAGTGTAGTCTACAAGGGAACCATGAAAGGTGGGCCTGAGATTGCTGTAATATCTCTCTGCATTAAGGAGGAGCATTGGACAGGATACCTTGAGCTCTATTTTCAGAGAGAGGTGGCAGACTTGGCAAGACTAAATCACGAGAACACTGGAAAACTTCTGGGATATTGTAGAACAAGCTCTCCATTTACAAGGATGCTGGTTTTTGAGTATGCTTCAAACGGAGCACTCCATGAGCACTTACACTATGGAGAAGGGAGCCAGTTATCATGGACGCGACGTATGAGAATCATTATTGGCATTGCCCGTGGACTGAAGTATCTACACACAGAAGTTGATCCTCCATTCACTATATTAGAGCTGAATTCTAATGCTGTATACCTTAGGGAGGATTTTTCACCTACGCTGGTTGATTTTGAGAGTTGGAAGACAATACTTGCTAGGTCAGAAAAGAATTCTGAATCTGTTGGAAGTGAAGGCGCTGTTTGTGTTCTTCCACGTTCTTTCGAGGCACGCCATCATGATCCCCAGGGAAATGTATATGCTTTTGGCATACTTCTGCTGGAGATAATAAGTGGGAGACCTCCATATTACAAGGACAAAGGATCCTTGGTAGATTGGGCCAAGGAGTACCTAGAAATGCCAGAGGTAATGTCATATGTGGTGGATCCAGAGTTGAAACATTTCAGATACGAGGACCTTGCAGCAATATGCGAGGTAGCGAATCTCTGTATCAATCCAGACCCCACCAAGCGTCCATCCATGGCAGAAATATGTAGGACGCTGGAGAGCCGGATTGACACATCGATGAGCGTGGAGATCAAGTCTTCATCTTTGGCTTGGGCGGCTGAACTTGCACTTTTATCACAACATGATTGA 1998 0.4384 MKLFASLLFLSLISMVSFANCDTVPLKEVWALTAFKEAVYEDPYLVLSNWNTLDSVPCEWFGVSCTKDRDHIIKLNISGSSLRGFLAPELGEITYLQELILHDNNLIGTIPKELFMLNSLKVLDLGKNLLSGPIPPEIGNLAQVVKINLQSNGLTGRLPPALGNLRCLQELRLDRNKLQGLVPARGSSSFPTNMRGMYPSIANLTGLCRLPQLQVADLSYNFFVGGIPACLKYLPRSSFQGNCFQSKELKQRSSVQCAGASPAKSRSVANSKQPPAGYVVSKHHRASQPTWLLALEIATGTLVGSIFLVAMLAALLKWDNKSSIIWPWKKYASRKDHMTVYIGSEILKDVRSFSRQELEVACEDFSNIIGSSPDSVVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARLNHENTGKLLGYCRTSSPFTRMLVFEYASNGALHEHLHYGEGSQLSWTRRMRIIIGIARGLKYLHTEVDPPFTILELNSNAVYLREDFSPTLVDFESWKTILARSEKNSESVGSEGAVCVLPRSFEARHHDPQGNVYAFGILLLEIISGRPPYYKDKGSLVDWAKEYLEMPEVMSYVVDPELKHFRYEDLAAICEVANLCINPDPTKRPSMAEICRTLESRIDTSMSVEIKSSSLAWAAELALLSQHD 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g00788 665 FunFam Probable leucine-rich repeat receptor-like protein kinase At2g33170 26 181 - -
Accr9g00788 665 Pfam Leucine rich repeat N-terminal domain 29 65 IPR013210 -
Accr9g00788 665 FunFam Inactive receptor-like serine/threonine-protein kinase 337 444 - -
Accr9g00788 665 Gene3D Ribonuclease Inhibitor 27 140 IPR032675 -
Accr9g00788 665 Pfam Leucine rich repeat 95 154 IPR001611 GO:0005515
Accr9g00788 665 Gene3D Phosphorylase Kinase; domain 1 338 444 - -
Accr9g00788 665 Gene3D Ribonuclease Inhibitor 141 261 IPR032675 -
Accr9g00788 665 ProSiteProfiles Protein kinase domain profile. 363 639 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr9g00788 665 SUPERFAMILY L domain-like 27 235 - -
Accr9g00788 665 Gene3D Transferase(Phosphotransferase) domain 1 445 653 - -
Accr9g00788 665 SUPERFAMILY Protein kinase-like (PK-like) 341 636 IPR011009 -
Accr9g00788 665 PANTHER PROTEIN MALE DISCOVERER 2 12 662 - -
Accr9g00788 665 Pfam Protein tyrosine and serine/threonine kinase 367 635 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr9g00788 Accr-Chr9 9207529 9211604 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr9g00788 41 640 Receptor kinase-like Gene Family AT5G45780 29.248 1.62e-57 202
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Accr9g00788 PK_Tyr_Ser-Thr 4.8e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr9g00788 - - gmx:100794714 1003.43