Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g00772 ATGGCGCCATTGCCGGTGGAGCAGACCGGTGAGTCAGCAACGACTGACTCTCAGAGATCTATTCCGACGCCGTTTCTGACGAAAACGTACCAGCTTGTGGATGACCCCTCTATGGATGACCTTATTTCCTGGAATGAAGATGGAACCAGTTTCATAGTTTGGCGACCCGCCGAATTCGCTCGCGATTTGCTTCCAAAGTATTTCAAACACAATAATTTTTCCAGTTTCGTCCGTCAACTAAATACTTATGGATTTCGGAAGGTTGTCCCTGATCGGTGGGAATTCGCGAATGACTGTTTCCGGCGAGGCGAGAGAAGCCTGCTCCGAGACATTCAACGGCGGAAAATATCACCGTATGCGGCTGCCGGAGGTGCGGCCAATGCAGTGACGGTGGCTGCAGTACCTGCCGCTGCTATAGGGGTGTCTCCGACGAACTCCGGTGAGGAACAGGTAATCTCTTCTAACACATCCCCGGTTGCCGGGAATAATACAGTGCAGCGTACCACAAGTTGCACCACTGCACCCGAGATCTTAGAAGAGAATAAAAAGCTTAGGAAAGAGAACATGCAATTGAGTAATGAATTGAGTCAATTGAAGGGGCTCTGTAATAGCATATTGACGTTGATGTCGAATTATGCTTCAAGCCAATTAGAGTCCAGTAGCGCCGCCGACGGAAAACCACAGGACCTTTTCCCTGCGGCGCAGCTTTCGGCTGAAGAAGCCATCGTAGGCAGCGGCGCTTCGCGTGAGATGAAAGTTGCAGAGGAGGAGGTGCCCAAATTGTTTGGGGTTTCAATTGGGGCAAAACGACGTCGGAGTTCAGAGCGTGAGGAGGCAGAGAAAGAAGAACAAAATCAAACACAGTCGTCCCAAGAACCCGATGGTGGCTCCGATGTTAAAACAGAGCCGCTAGATCGTAGTAACTCCGATGATCAGGAGACACCCTGGTTGGAACTTGGGAAACAATAG 969 0.5046 MAPLPVEQTGESATTDSQRSIPTPFLTKTYQLVDDPSMDDLISWNEDGTSFIVWRPAEFARDLLPKYFKHNNFSSFVRQLNTYGFRKVVPDRWEFANDCFRRGERSLLRDIQRRKISPYAAAGGAANAVTVAAVPAAAIGVSPTNSGEEQVISSNTSPVAGNNTVQRTTSCTTAPEILEENKKLRKENMQLSNELSQLKGLCNSILTLMSNYASSQLESSSAADGKPQDLFPAAQLSAEEAIVGSGASREMKVAEEEVPKLFGVSIGAKRRRSSEREEAEKEEQNQTQSSQEPDGGSDVKTEPLDRSNSDDQETPWLELGKQ 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g00772 322 MobiDBLite consensus disorder prediction 269 287 - -
Accr9g00772 322 SUPERFAMILY "Winged helix" DNA-binding domain 22 114 IPR036390 -
Accr9g00772 322 Coils Coil 174 201 - -
Accr9g00772 322 PRINTS Heat shock factor (HSF) domain signature 25 48 IPR000232 GO:0003700|GO:0006355|GO:0043565
Accr9g00772 322 PRINTS Heat shock factor (HSF) domain signature 63 75 IPR000232 GO:0003700|GO:0006355|GO:0043565
Accr9g00772 322 PRINTS Heat shock factor (HSF) domain signature 76 88 IPR000232 GO:0003700|GO:0006355|GO:0043565
Accr9g00772 322 SMART hsfneu3 21 114 IPR000232 GO:0003700|GO:0006355|GO:0043565
Accr9g00772 322 MobiDBLite consensus disorder prediction 249 322 - -
Accr9g00772 322 MobiDBLite consensus disorder prediction 145 166 - -
Accr9g00772 322 ProSitePatterns HSF-type DNA-binding domain signature. 64 88 IPR000232 GO:0003700|GO:0006355|GO:0043565
Accr9g00772 322 MobiDBLite consensus disorder prediction 1 21 - -
Accr9g00772 322 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 17 290 IPR027725 -
Accr9g00772 322 FunFam Heat stress transcription factor B-4 17 115 - -
Accr9g00772 322 MobiDBLite consensus disorder prediction 298 312 - -
Accr9g00772 322 Pfam HSF-type DNA-binding 25 114 IPR000232 GO:0003700|GO:0006355|GO:0043565
Accr9g00772 322 Gene3D - 17 115 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr9g00772 Accr-Chr9 9112855 9113926 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr9g00772 16 321 HSF AT4G11660 55.891 1.00e-109 322
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Accr9g00772 HSF_DNA-bind 6.8e-33 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr9g00772 K09419 - gmx:100791020 421.779