Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g00769 ATGGGCAAGGTATCCAAATGGTTCCGTGGTCTTCTCAGTCTTAAAAAGGCTGATTCCTCATCTCCCACTCCCTCCACCACCTCGCTTCCAAAACCACCCAAAGGGAAACGCCGATGGAGCTTCGTTAAATCTCACAGCGAAATCGATAACCTCCCTGCCATCACCACCGCTACTGCAAAAACCGGCACTCACAATAATGACAGTCACACTTTCGCCGCGGTGGCTGCAGCCTCCTCTACACTCAGACTTCACAGCGGCGGCAGAGGATGCGTCCCAGCCACGGTGGAGACCACCGCTAACCGTGAAGAATGGGCAGCCATTAAGATTCAGGCCGCTTTTCGTGGCTGTTTGGCAAGGAGAGCCTTGCGAGCGCTAAAGGGATTGGTAAAGCTGCAGGCATTGGTGAGAGGTCAGGTGGAGAGGAGGCGGACGGCTGAGCAGCTGCAAAAAATGCAACTACTCTTGCGAGCTCAGGCTCACGTTCGGGCGGGGCGGCTTCGGTCATCTTTGATCTCTAAGTCATCAAATGTCAACCTCCATGGTCCGGCAACACCTGACAAGGTTGAAAACCCCATCAGATCCAAGAGCATGAAATATGATCATTCATCAACACTCAAGAGAGATAATTCCAAATCCTATGCCCAGATCAGTGGCAATAAGGAGAAGTGTTGGAAGACAACAGACAGTTGGGTGGATGAAAAATCATGGAATCGACGAAGATCGTTGGTTGGAACCTGTGTGGACAATGATGAAAGAAATGTAAGGATCCTGGAAATGAATTCTGAAAAAGGAATTTTTGCACCAAAACGCAGAGCCAGAAACCTCTTTCACTCCGCTAATCTTGCTTTAGTTTCTGATCATTATAGTCAGACTCTGATGACCCCCACAAAGAACTCAACAATTCACCATTCTGGTCCAATCCACCGTGAAGTTCGCCAATCTTACAGTCCACCAGAAGGACATGAAGTTGAAGAAACCCCATTCTGCACAGCAAACAACAGTCCTCAGTTTTTTTCTGGGTCCTCTCGGGATGGTAGCTCTAAAAGAAGCCCTTTTACTCCCACCAGGAGTGATGGTTCAAGAAACTATGCAAGTGCTTATTCTGAGCGCCCAAGTTATATGGCTTATACAGAATCTTCCAAGGCAAAGGTCAGATCTCTCAGTGCTCCAAAACAGAGGACAAGATATGAGAGGTCTGGTTCGTCTAAAAGTTTCTCAATGAACGGATTTGGAGGGTCAAAATTGACTGCACAGAGGACCTCTGCTTTGCATGCAAGCTTAACTAGCAAAGCCTATCCAGATTCTGGTCGTTTGAATAAGTTTGGTTTGCCTATGAGGTATAGAAACTGA 1350 0.477 MGKVSKWFRGLLSLKKADSSSPTPSTTSLPKPPKGKRRWSFVKSHSEIDNLPAITTATAKTGTHNNDSHTFAAVAAASSTLRLHSGGRGCVPATVETTANREEWAAIKIQAAFRGCLARRALRALKGLVKLQALVRGQVERRRTAEQLQKMQLLLRAQAHVRAGRLRSSLISKSSNVNLHGPATPDKVENPIRSKSMKYDHSSTLKRDNSKSYAQISGNKEKCWKTTDSWVDEKSWNRRRSLVGTCVDNDERNVRILEMNSEKGIFAPKRRARNLFHSANLALVSDHYSQTLMTPTKNSTIHHSGPIHREVRQSYSPPEGHEVEETPFCTANNSPQFFSGSSRDGSSKRSPFTPTRSDGSRNYASAYSERPSYMAYTESSKAKVRSLSAPKQRTRYERSGSSKSFSMNGFGGSKLTAQRTSALHASLTSKAYPDSGRLNKFGLPMRYRN 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g00769 449 SMART iq_5 101 123 IPR000048 GO:0005515
Accr9g00769 449 SMART iq_5 124 145 IPR000048 GO:0005515
Accr9g00769 449 ProSiteProfiles IQ motif profile. 102 130 IPR000048 GO:0005515
Accr9g00769 449 MobiDBLite consensus disorder prediction 384 407 - -
Accr9g00769 449 ProSiteProfiles IQ motif profile. 126 152 IPR000048 GO:0005515
Accr9g00769 449 PANTHER IQ-DOMAIN 5-RELATED 1 408 - -
Accr9g00769 449 Gene3D - 99 153 - -
Accr9g00769 449 MobiDBLite consensus disorder prediction 311 366 - -
Accr9g00769 449 MobiDBLite consensus disorder prediction 327 366 - -
Accr9g00769 449 MobiDBLite consensus disorder prediction 16 37 - -
Accr9g00769 449 Pfam IQ calmodulin-binding motif 104 123 IPR000048 GO:0005515
Accr9g00769 449 Pfam Protein of unknown function (DUF4005) 335 400 IPR025064 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr9g00769 Accr-Chr9 9057471 9060428 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr9g00769 103 448 IQD Protein Family AT4G23060 40.659 8.50e-57 193
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr9g00769 - - qsa:O6P43_024223 401.749