Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g00756 ATGGCGTCATCGTCGTCATCCAAGAGCAAGAGTAGGCACCCACTGTATCATGGAATTCGCTGCCGTGGTGGCAAATGGGTGTCCGAAATCCGCGAGCCACGTAAGGATTCTCGCATATGGCTCGGAACGTTCCAGACGCCGGAGATGGCCGCCGCTGCCTATGACGTGGCCGCGCTAGCCCTCAAAGGAAGCGAAGCGGTCCTCAACTTCCCGCACTGGGTCCACACTTATCCGGTGCCGGCTTCTTCGTCTGCCAATGACATTCGCAGTGCCGCCAATGCCGCAGCCGCACTTATGGCGCCTGATCAAGAACAGACCCAAACCAATGACAACGACGTCGAAGGTAATGTTAATCATGGTAATGATCAGAGCAACAATGTTTCGTGGCCGGGAACAGATCATCAGTTTGTGGACGAGGAAGCCATATTCGACATGCCAAATTTGCTGGTGGACATGGCCGGAGGAATGCTGCTCTCGCCACCTCGAATCGAACCACCACCCTCCGATAACTCTCCCGACGACGATAAGTCGTACGGAGGAACTTTGTGGAACTATTTTTGA 561 0.5455 MASSSSSKSKSRHPLYHGIRCRGGKWVSEIREPRKDSRIWLGTFQTPEMAAAAYDVAALALKGSEAVLNFPHWVHTYPVPASSSANDIRSAANAAAALMAPDQEQTQTNDNDVEGNVNHGNDQSNNVSWPGTDHQFVDEEAIFDMPNLLVDMAGGMLLSPPRIEPPPSDNSPDDDKSYGGTLWNYF 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g00756 186 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 4 153 - -
Accr9g00756 186 SMART rav1_2 15 79 IPR001471 GO:0003700|GO:0006355
Accr9g00756 186 CDD AP2 14 72 IPR001471 GO:0003700|GO:0006355
Accr9g00756 186 MobiDBLite consensus disorder prediction 100 128 - -
Accr9g00756 186 SUPERFAMILY DNA-binding domain 15 72 IPR016177 GO:0003677
Accr9g00756 186 Pfam AP2 domain 16 63 IPR001471 GO:0003700|GO:0006355
Accr9g00756 186 MobiDBLite consensus disorder prediction 158 180 - -
Accr9g00756 186 ProSiteProfiles AP2/ERF domain profile. 15 71 IPR001471 GO:0003700|GO:0006355
Accr9g00756 186 FunFam Ethylene-responsive transcription factor 2 14 72 - -
Accr9g00756 186 Gene3D AP2/ERF domain 15 72 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr9g00756 Accr-Chr9 8882034 8882594 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr9g00756 2 185 AP2-EREBP Transcription Factor Family AT5G52020 51.337 1.04e-47 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Accr9g00756 AP2 4.7e-09 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr9g00756 - - gmx:100793589 197.593