Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g00744 ATGACGTCGTCTCAGGAGCATGACGTGGATCAGGACGACGATGGCGGAACCTCCGACCTCAGCACCAGCGCCGGCGACTCTGGGGCTATCGACGCCGACAAAAACAATGGACTTCCCAAAGAACCTGTCTCTGACGATCCCTTGGGTTTCCAGGTCTTGACGTTGAAGGAGGAGCCTGTTGATTCGAACTCACCGTCAGACCAGGAACAAAAATCGGAGCCTTCCTCGTCGGCTCCGATTGGAGTCGTTCCGGTCGCGATGCAGATGCAAATGCCCCTAAATATGCCCATGCCCATGCCGGTCGCTACCGCGAGACGCTCCTCCACCAAGGACCGCCACACGAAGGTGGAAGGCCGTGGACGTAGGATCCGAATACCCGCAACTTGCGCGGCTCGGATCTTTCAGCTGACTCGGGAGTTAGGTCATAAGTCTGATGGCGAAACCGTGAGGTGGCTCCTCGAACATGCGGAGCAGGCCATCATCGAGGCCACCGGCACAGGCACCGTCCCAGCTATCGCTGTCTCCGTCGGGGGAACTCTGAAGATTCCTACAACGTCTAGCGCCCACAGCAATCCGGACTCGGAACTCAGGAAGAAGCGGAAAAGGCCGTCCAATAGTGAGTTTGTGGACGTGAGTAGTGATGCCGTTTCACAATCGTCCGGTTTGGCCTCAGTTCAACCGGCTCTTCCGCAGGGCCTTGTGCCTGTGTGGGCAGTGGGCAACACTAATATGATGATCCCGGCAAACGCCTTTTGGATGATCCCTCCAGCGACAACGGCGACGCCAGTGGGCGGAAGTTCGGGATCGTCAAACCAACAACCTCAGATATGGACTTTGTCGCCGACGGTAACGCCCGTATTCAACGTGTCCGCCAGGCCCGTATCATCTTTGATGGCAACAACAAATACCTCGAGCGTCATAGAAGCGTCGCCGTTGGGATGCAACAATTCGTCTAACTCAGCGGCGGTGAGCACGAGCACGGTGGGGCCAAGGGCGGCGAAGAAATCGACGATGGCACCGAGCGTGGCGACGGGCAGCAGCAGTAGCAGCGGGAGCAAGGCGCAGATGTTGAGGGATTTTTCATTGGAGATTTACGATAAGCAAGAGTTACAGTTGATGGGGCGATCAGGGAACAAGCAAGCATAA 1146 0.5698 MTSSQEHDVDQDDDGGTSDLSTSAGDSGAIDADKNNGLPKEPVSDDPLGFQVLTLKEEPVDSNSPSDQEQKSEPSSSAPIGVVPVAMQMQMPLNMPMPMPVATARRSSTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETVRWLLEHAEQAIIEATGTGTVPAIAVSVGGTLKIPTTSSAHSNPDSELRKKRKRPSNSEFVDVSSDAVSQSSGLASVQPALPQGLVPVWAVGNTNMMIPANAFWMIPPATTATPVGGSSGSSNQQPQIWTLSPTVTPVFNVSARPVSSLMATTNTSSVIEASPLGCNNSSNSAAVSTSTVGPRAAKKSTMAPSVATGSSSSSGSKAQMLRDFSLEIYDKQELQLMGRSGNKQA 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g00744 381 ProSiteProfiles TCP domain profile. 109 163 IPR017887 -
Accr9g00744 381 MobiDBLite consensus disorder prediction 339 354 - -
Accr9g00744 381 MobiDBLite consensus disorder prediction 57 77 - -
Accr9g00744 381 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 65 371 IPR005333 GO:0003700
Accr9g00744 381 MobiDBLite consensus disorder prediction 192 207 - -
Accr9g00744 381 MobiDBLite consensus disorder prediction 182 213 - -
Accr9g00744 381 MobiDBLite consensus disorder prediction 95 119 - -
Accr9g00744 381 MobiDBLite consensus disorder prediction 1 82 - -
Accr9g00744 381 MobiDBLite consensus disorder prediction 318 332 - -
Accr9g00744 381 MobiDBLite consensus disorder prediction 318 354 - -
Accr9g00744 381 Pfam TCP family transcription factor 108 191 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr9g00744 Accr-Chr9 8724450 8725595 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr9g00744 105 378 TCP Transcription Factor Family AT2G45680 50.165 7.16e-72 227
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Accr9g00744 TCP 2.3e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr9g00744 - - pcin:129284605 574.318