Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g00707 ATGGATCCAATAGCAGGGCATGGGCATGGGTATGGGCAGTCACTTCCCCCACCATTCCATATGCACCACCAGCATCAATCTCATCAATTTCAGTCGCTACACCAAAACACAGAAGACGAACAAAGCGCAAGTAGCAGTTGCCTAAACCTCACCGCCGGCAAGAGAGAACGCGAAGAACAAACCAGCAACAACAACATCAATACCGATCAAGGCAATAATATGAACAACGGAGTAGAAGGTGGAGAAATCACGAGAAGGTCTCGTGGAAGACCCTCCGGATCCAAGAACAAACCAAGACCGCCCATCATCATAACCCGAGACAGTGCTAATGCCCTTAGAACCCACGTCATGGAGGTCGCTGACGCTTGTGACATCGTCGAGAGCGTCTCCAGTTTCGCCCGGCGCCGCCAGAGAGGCGTTTGCATTATGAGCGGCACCGGCACCGTCGCTAATGTCACCTTGAGGCAACCAGCTTCTTCCGGCGCTGTTGTTTCTCTTCATGGAAGGTTTGAAATCTTGTCGCTCGCCGGATCCTTCTTGCCGCCACCGGCTCCCCCGGCCGCGTCCGGTTTGACCATATATTTGGCTGGCGGACAAGGTCAGGTGGTCGGGGGAACCGTGGTGGGCGCGCTTATGGCTTCGGGACCGGTGGTGATCATGGCGGCGTCGTTTAGCAACGCTGCTTATGAGAGGCTTCCTTTGGAGGAAGAAGACCCGTCGGTGGCGATTCAAGGCCCCGGAATCGGTTCGCCGGGCGGAGTTGGTCAGCAGCAGCAACAAATATTTGGGGACGCAACAGGTCCACTCATGCATGCTTTGCCTCCTAATCTTATCAATTCTATGCAGACGTCCGATCAACCTTTCTGGGCTCCGGCTCGTCCTCCTTTCGGATGA 894 0.5492 MDPIAGHGHGYGQSLPPPFHMHHQHQSHQFQSLHQNTEDEQSASSSCLNLTAGKREREEQTSNNNINTDQGNNMNNGVEGGEITRRSRGRPSGSKNKPRPPIIITRDSANALRTHVMEVADACDIVESVSSFARRRQRGVCIMSGTGTVANVTLRQPASSGAVVSLHGRFEILSLAGSFLPPPAPPAASGLTIYLAGGQGQVVGGTVVGALMASGPVVIMAASFSNAAYERLPLEEEDPSVAIQGPGIGSPGGVGQQQQQIFGDATGPLMHALPPNLINSMQTSDQPFWAPARPPFG 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g00707 297 PIRSF ESCAROLA 19 296 IPR014476 GO:0003680
Accr9g00707 297 CDD DUF296 113 180 IPR005175 -
Accr9g00707 297 ProSiteProfiles PPC domain profile profile. 109 249 IPR005175 -
Accr9g00707 297 MobiDBLite consensus disorder prediction 24 51 - -
Accr9g00707 297 Gene3D - 112 241 - -
Accr9g00707 297 Pfam Plants and Prokaryotes Conserved (PCC) domain 113 226 IPR005175 -
Accr9g00707 297 MobiDBLite consensus disorder prediction 1 103 - -
Accr9g00707 297 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 39 290 IPR014476 GO:0003680
Accr9g00707 297 MobiDBLite consensus disorder prediction 63 80 - -
Accr9g00707 297 FunFam AT-hook motif nuclear-localized protein 112 239 - -
Accr9g00707 297 SUPERFAMILY AF0104/ALDC/Ptd012-like 109 239 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr9g00707 Accr-Chr9 8260868 8261761 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr9g00707 1 296 AT-hook Motif Nuclear Localized (AHL) Family AT4G22810 51.603 5.50e-80 243
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr9g00707 - - gmx:100807581 348.591