Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g00679 ATGAATACGTTTTCACATGTTCCTCCAGGCTTCCGGTTCCACCCCACAGATGAAGAACTGGTTGATTATTACCTAAGAAAAAGGGTAGCCTCCAAAAGGATTGACCTAGATGTTATTAAAGATGTGGATCTCTATAAAATTGAGCCATGGGATCTTCAAGAACTATGCAAAATAGGAACGGAAGAACAAAATGAGTGGTATTTCTTCAGCCACAAAGATAAGAAGTACCCAACAGGAACTCGCACAAACAGAGCCACAAAAGCAGGATTCTGGAAAGCCACAGGAAGAGACAAGGCAATCTACCGTAGGCATTGCCTTATTGGCATGAGAAAGACTCTTGTTTACTACAAGGGACGAGCCCCAAACGGACAGAAGTCTGACTGTATCATGCACGAGTACCGACTTGAAACTAATGAAAATGCAGCTTCTCAGGAAGAAGGTTGGGTTGTATGTCGAGTGTTCAAGAAGAAAATGACAAGCGTGCGGAGAGTGGAGGAGTATGAGTCAGCATGCTGGTTTGAGGACCAAGTATCGTTGATGCAAGAACTTGAATCTGCAAAACCAATATCTCAACCTTATGCATCTAATTACCACCACCACAATCAGTACTACGTACCTTGCAAGCAGGAACTTCATCAATTGCGATATAACGTAACCCTTCCCCATGAAGTTTTCCTACAGCTTCCTCAACTTGAAAGCCCCAAAGTTCCTTACTCATCAGCAGCAGCCAGTTTGAGCTGCAATAATTCAACGGTCCCTGCTTATGCCTATGCCAGCAACAACAACAACAACAATAATAATGGTAGTAGCTTGCACTCGCCCAATTCACTCACTCAGGAAGAGAACATAGCTTGTGGAAACAATGATCATCAAGTGACGGCTGATTGGCGAGTTCTTGATAAATTTGTGGCTACTCAACTCAGCAGTCACCACCAACAAGCTGATGCTTCCAAGGAAGTGCTCCATGTGGATGAACCTATCACTATTCAGGCAAATGATCGTCAACTTAAAAGGCCAGAAATTGGGCAGCAGGAATATGCCTCCACATCCACCTCAATAAGTTGCCAGATTGACCTGTGGAACTGA 1086 0.4383 MNTFSHVPPGFRFHPTDEELVDYYLRKRVASKRIDLDVIKDVDLYKIEPWDLQELCKIGTEEQNEWYFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAIYRRHCLIGMRKTLVYYKGRAPNGQKSDCIMHEYRLETNENAASQEEGWVVCRVFKKKMTSVRRVEEYESACWFEDQVSLMQELESAKPISQPYASNYHHHNQYYVPCKQELHQLRYNVTLPHEVFLQLPQLESPKVPYSSAAASLSCNNSTVPAYAYASNNNNNNNNGSSLHSPNSLTQEENIACGNNDHQVTADWRVLDKFVATQLSSHHQQADASKEVLHVDEPITIQANDRQLKRPEIGQQEYASTSTSISCQIDLWN 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g00679 361 ProSiteProfiles NAC domain profile. 7 156 IPR003441 GO:0003677|GO:0006355
Accr9g00679 361 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 6 264 - -
Accr9g00679 361 FunFam NAC domain-containing protein 16 160 - -
Accr9g00679 361 Pfam No apical meristem (NAM) protein 8 135 IPR003441 GO:0003677|GO:0006355
Accr9g00679 361 Gene3D NAC domain 16 160 IPR036093 GO:0003677|GO:0006355
Accr9g00679 361 SUPERFAMILY NAC domain 5 156 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr9g00679 Accr-Chr9 7927889 7929438 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr9g00679 1 359 NAC Transcription Factor Family AT1G62700 53.676 4.44e-131 379
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Accr9g00679 NAM 1.3e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr9g00679 - - tcc:18606319 486.108