Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g00673 ATGGACTTGAAGTCGTCTCATGTGTCTCCTGTTCTAACTGATCCTGTTCCCGTTAACAAGTCAAGACTAGGAATCCATTCTAGTGTATTTAGTTACTCGCAGCAGGATTCAACCCCTGCTACACCAGGCAAGTACACAAGAACCGGTTCGAGGAAAGGTGTTGGCAATCTTGATGATGTTCGCTCCAATGGATGGCTAGACGCCATGAAAGCCTCCTCACCCCCGAGGAAGAAGCTGGTTAAGGGTTCTAATACTACTAATACTCAGCTCACTCATTTTGACTCTGACATTGAGGACTATAACTCCTGGATGCGTGATTATCCATCCGCATTGGACTCTTTCGACAACCTTATTGACCGTGCTAAGGATAAGAAGATAGCCCTGTTTCTAGATTATGATGGAACTCTTTCCCCAATTGTGGATGATCCAGATTCTGCTTTTATGTCCGAAGCTATGCGGGCAACGGTGAGAGATGTTGCAAAGTATTTTCCCACGGCAATCATTAGTGGAAGAAGCCGTGATCAGATTATTGAGCTAGTAAAATTAAGGCATCTGTACTATGCTGGGAGTCATGGGATGGACATCATTGGCCCTGCCTGCGAAGCTCTGTTCGGCAACCATCCAAATTGTGTCAAATCTACTGACCATCAGGGAAAGGAAATAACTGTGTTTCAACCCGCAAAAGAATTCCTGCCTATGATCGACGAGGTTTTTAGAACCCTTGTCGAGATAACTAAAGATATAAAAGGCGCAAAGGTTGAAAATCACAAGTTTTGCGCCTCTGTACATTATCGTAATGTAGATGAGAGTGATTGGATAACTGTGGGACAACGAGTCCACGACATGCTAAAAAACTACCCACGTTTACGTTCAACTCACGGACGCAAGGTTTTAGAGGTGCGTCCGGTGATTGATTGGAACAAAGGAAAAGCAGTTGAGTTTTTACTCGAGTCTCTAGGGCTAACTGAGAGGGAAGACGTGATTGCCATATACATAGGGGATGACAAGACAGACGAGGATGCGTTTAAGGTATTGAGGGAGAACAAGAGAGGATATGGCATAGTGGTGTCGTCGGTGAGGAAAGAGAGCAACGCCTTTTACTCTCTCAGGGACCCCTCTGACGTCATGAAATTTCTGCAGCTTCTCCTCAACTGCAAGACCCAACAAGACACCCACCAGAAGCAATCCCTCTCTCTTGCCCTTTAA 1206 0.4536 MDLKSSHVSPVLTDPVPVNKSRLGIHSSVFSYSQQDSTPATPGKYTRTGSRKGVGNLDDVRSNGWLDAMKASSPPRKKLVKGSNTTNTQLTHFDSDIEDYNSWMRDYPSALDSFDNLIDRAKDKKIALFLDYDGTLSPIVDDPDSAFMSEAMRATVRDVAKYFPTAIISGRSRDQIIELVKLRHLYYAGSHGMDIIGPACEALFGNHPNCVKSTDHQGKEITVFQPAKEFLPMIDEVFRTLVEITKDIKGAKVENHKFCASVHYRNVDESDWITVGQRVHDMLKNYPRLRSTHGRKVLEVRPVIDWNKGKAVEFLLESLGLTEREDVIAIYIGDDKTDEDAFKVLRENKRGYGIVVSSVRKESNAFYSLRDPSDVMKFLQLLLNCKTQQDTHQKQSLSLAL 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g00673 401 Pfam Trehalose-phosphatase 129 373 IPR003337 GO:0003824|GO:0005992
Accr9g00673 401 FunFam Trehalose 6-phosphate phosphatase 227 303 - -
Accr9g00673 401 NCBIfam HAD-IIB family hydrolase 128 346 IPR006379 -
Accr9g00673 401 FunFam Trehalose 6-phosphate phosphatase 233 392 - -
Accr9g00673 401 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 40 394 IPR044651 GO:0004805|GO:0005992
Accr9g00673 401 NCBIfam trehalose-phosphatase 124 383 IPR003337 GO:0003824|GO:0005992
Accr9g00673 401 SUPERFAMILY HAD-like 127 384 IPR036412 -
Accr9g00673 401 CDD HAD_TPP 127 377 - -
Accr9g00673 401 Gene3D - 126 204 IPR023214 -
Accr9g00673 401 Gene3D - 224 398 IPR023214 -
Accr9g00673 401 MobiDBLite consensus disorder prediction 33 61 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr9g00673 Accr-Chr9 7854570 7856555 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr9g00673 122 382 Trehalose Biosynthesis Gene Families AT1G70290 27.798 3.55e-11 63.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr9g00673 K01087 - qsa:O6P43_024315 565.844