Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g00656 ATGGGGTGTGACTTTTCCAAGTTCTCAGCATGCTGCTCGGGTACAGAGCATAGTGGTCCAGTTCTCGAAGCAAATATTGATGAAAATGAAGAGAATAGTGAGGCCACTGATGTGCCACCATTTCAAGAATATACAATTGATCAGCTTAGGAAGGCTACTTCTGGATTTGCCGTCGAGAATATAGTTTCTGAGCATGGAGAAAAGGCTCCAAATGTGGTTTATAAAGGGAAACTAGAAAATCAAACGCGAATTGCTGTCAAACGGTTCAATAGGTCAGCCTGGCCTGATGCACGACAATTTTCAGAAGAAGCCAGGGCTGTTGGACATCTAAGGAACGAAAGATTGGCAAATTTACTTGGATGTTGCTGTGATGGTGATGAGAGGTTACTTGTTGCAGAATATATGCCTAATGATACTTTGGCAAAGCACTTGTTCCACTGGGAAACTCAGCCCATGAAATGGGCAATGCGACTAAGAGTTGCTTTATACCTTGCCCAAGCACTAGAATATTGTACTAGCAAAGGACGCGCACTGTATCATGATCTAAATGCTTATAGAGTACTCTTTGATGATGAAGGAAATCCTAGACTCTCATGCTTTGGCTTGATGAAAAACAGTCGGGATGGTAAAAGTTATAGTACAAACCTTGCATTTACTCCGCCTGAGTATTTAAGGACAGGTAGAGTTACTCCTGAAAGTGTAACATATAGTTTTGGAACCCTTTTGCTTGACCTTCTCAGTGGAAAGCATATTCCTCCAAGCCATGCACTTGACCTGATTCGAGACAGGAACCTTCAGATGCTGACAGATTCTTGTCTAGAAGGACAATTTTCAAATGATGAGGGGACTGAATTAGTGCGCTTGGCCTCACGATGTTTACAATCAGAACCCCGGGAGCGTCCTTATCCAAAATCATTGGTTTCTGCTTTAATAGATCTGCAGAAGGATTCTGAGGTTCCTTCTCATGTTTTGATGGGTATACCACATGGCACAAATGCTTTACCACTTTCACCATTTGGTGAGCAATGTCTAAGAATGGATTTGACTGCCATCCATGAGGTCCTTGAAAAACTTGGGTATAAAGATGATGAGGGTGCTGCTACTGAGCTTTCATTCCAAATGTGGACCAACCAGATGCAAGAAACACTGAACTCAAAGAAGAAGGGAGACTCCGCTTTTCGTCATAAAGACTTCAAAGCTGCAATTGATAGCTATACTCAGTTCATTGATGTTGGAACTATGGTTTCTCCAACTGTTTATGCACGCCGCAGTCTGTCTTATCTTATGAACAACATGCCAGAAGAAGCACTGAAGGATGCATTGCAGGCACAATTAGTTTCCCCTGTTTGGCATATTGCTTACTATTTACAGGCTGTGGCACTTCTTGCATTGGGCAGGGAAAATGAGGCCCAGGTGGCACTTAAAGAGGCTTCTTCACTTGAAAGTAAAAAGAACACAAATTAA 1464 0.4235 MGCDFSKFSACCSGTEHSGPVLEANIDENEENSEATDVPPFQEYTIDQLRKATSGFAVENIVSEHGEKAPNVVYKGKLENQTRIAVKRFNRSAWPDARQFSEEARAVGHLRNERLANLLGCCCDGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALYLAQALEYCTSKGRALYHDLNAYRVLFDDEGNPRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVTYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFSNDEGTELVRLASRCLQSEPRERPYPKSLVSALIDLQKDSEVPSHVLMGIPHGTNALPLSPFGEQCLRMDLTAIHEVLEKLGYKDDEGAATELSFQMWTNQMQETLNSKKKGDSAFRHKDFKAAIDSYTQFIDVGTMVSPTVYARRSLSYLMNNMPEEALKDALQAQLVSPVWHIAYYLQAVALLALGRENEAQVALKEASSLESKKNTN 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g00656 487 FunFam probable serine/threonine-protein kinase At4g35230 31 134 - -
Accr9g00656 487 Gene3D Phosphorylase Kinase; domain 1 29 134 - -
Accr9g00656 487 Gene3D Transferase(Phosphotransferase) domain 1 136 328 - -
Accr9g00656 487 Pfam Protein tyrosine and serine/threonine kinase 72 309 IPR001245 GO:0004672|GO:0006468
Accr9g00656 487 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 24 485 IPR045845 GO:0004672|GO:0009742
Accr9g00656 487 FunFam probable serine/threonine-protein kinase At4g35230 380 487 - -
Accr9g00656 487 FunFam probable serine/threonine-protein kinase At5g41260 136 327 - -
Accr9g00656 487 SUPERFAMILY Protein kinase-like (PK-like) 31 320 IPR011009 -
Accr9g00656 487 SUPERFAMILY TPR-like 386 482 IPR011990 GO:0005515
Accr9g00656 487 Gene3D Tetratricopeptide repeat domain 376 487 IPR011990 GO:0005515
Accr9g00656 487 ProSiteProfiles Protein kinase domain profile. 59 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr9g00656 Accr-Chr9 7576065 7582189 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr9g00656 29 310 Glycoside Hydrolase AT3G07070 34.516 8.52e-43 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Accr9g00656 PK_Tyr_Ser-Thr 5.4e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr9g00656 K14500 - qsa:O6P43_034239 857.055