Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g00643 ATGCCTATTGTAATGCCTTCTTCTTTGTCCTTGTCGTCGTTAATTTTGATTTCTGTTTTGTTATTGTTTCATGCAGGAAGAGTGAGATGTACACCCTCCGATGATAACACCCCAAGTTCACCACCACTAGTGTCTTCCACAAACTCCTCATCGAAGCACCGTCACCGTTGGGTGGGTCCTATCGGTTACCGTGTAATCACCGTGGACGTGAACGGAACAGGGCAATTCAGATCCGTGCAAGCCGCCGTGGATGCTGTCCCAGACAATAATCGAATGAACGTCGTCATTAATATTAGCGCTGGATGCTACGTAGAGAAGGTGGTGGTGCCGGCGACGAAATCCTATATAACGTTTCAGGGAGCGGGGAGGGACGTGACGGTGATAGAATGGCATGACAGAGCCAGCGACCCTGGTCCCAATGGACAACAGCTACGTACTTACAGAACTGCTTCTGTCACTGTCTTTGCCAACTATTTCTCTGCCAGGAATATCAGCTTCAAGAACACGGCGCCGGCGCCGATGCCGGGAATGGAGGGATGGCAAGCGGCGGCGTTTCGTATATCGGGGGACAAGGCATATTTCTCAGGATGCGGATTCTACGGTGCACAAGACACTCTTTGTGACGACGCGGGCCGCCATTATTTCAAGGACTGCTACATCGAGGGTTCCATTGATTTCATCTTCGGCAATGGCCGTTCCATGTACAAGGATTGTGTAATGCACTCGATAGCGACGAAATTCGGTTCGATAGCAGCCCACAAGAGAAAATACGTGGACGAGAAGACGGGCTTCGCATTCGTAGGGTGCCAGGTGACGGGTACGGGCCCACTCTATGTGGGACGGGCCTTGGGTCAATACTCCAGAATCGTCTACGCTTATACGTATTTTGATGACATTGTTACCCAAGAAGGTTGGGACGACTGGAACCATGTGGACAAAAAAAACAAGACTGTGTTTTTCGGAGTGTATAAGTGCCGGGGCCCAGGAGCTGCGGCGGCGCGTGGGGTGTCTTTTGCCCGTGAGCTTGACTTTGAATCTGCCCATCCCTTTCTCGTTAAGAGCTTCGTCAATGGCAGACACTGGATCGCACCTTCTGATGCTTAA 1104 0.5109 MPIVMPSSLSLSSLILISVLLLFHAGRVRCTPSDDNTPSSPPLVSSTNSSSKHRHRWVGPIGYRVITVDVNGTGQFRSVQAAVDAVPDNNRMNVVINISAGCYVEKVVVPATKSYITFQGAGRDVTVIEWHDRASDPGPNGQQLRTYRTASVTVFANYFSARNISFKNTAPAPMPGMEGWQAAAFRISGDKAYFSGCGFYGAQDTLCDDAGRHYFKDCYIEGSIDFIFGNGRSMYKDCVMHSIATKFGSIAAHKRKYVDEKTGFAFVGCQVTGTGPLYVGRALGQYSRIVYAYTYFDDIVTQEGWDDWNHVDKKNKTVFFGVYKCRGPGAAAARGVSFARELDFESAHPFLVKSFVNGRHWIAPSDA 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g00643 367 ProSitePatterns Pectinesterase signature 2. 220 229 IPR033131 -
Accr9g00643 367 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 61 363 - -
Accr9g00643 367 Gene3D - 63 366 IPR012334 -
Accr9g00643 367 Pfam Pectinesterase 66 358 IPR000070 GO:0030599|GO:0042545
Accr9g00643 367 MobiDBLite consensus disorder prediction 32 51 - -
Accr9g00643 367 SUPERFAMILY Pectin lyase-like 64 364 IPR011050 -
Accr9g00643 367 FunFam Pectinesterase 62 364 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr9g00643 Accr-Chr9 7410575 7412538 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr9g00643 10 367 Carbohydrate Esterase AT5G47500 70.492 0.0 530
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr9g00643 - - cam:101501763 584.334