Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g00620 ATGACTCGGCGATGTTCTCATTGCAGCCACAATGGCCATAACTCAAGGACTTGCCCGAACCGCGGTGTTAAGCTCTTTGGAGTTCGATTGACTGATGGCTCGATCAGAAAGAGTGCTAGTATGAGTAGTCTCAGTCACTATGCCGGGTCGAGCTCTGGAGCTCATCATGCCGTGTCCGTTAATTCGGGTTCGCCAGGTGAGACGCCTGATCATGGTGCTGCAGCTGACGGTTACGCCTCCGAGGATTTTGTTCCTGGTTCATCTTCAGTTTCCCGGGAGAGGAAGAAGGGTGTTCCATGGACTGAGGAGGAGCATAGATTGTTCTTACTTGGGTTGCAGAAACTTGGCAAAGGTGATTGGCGTGGAATTGCACGGAACTATGTTATATCAAGGACACCTACTCAAGTAGCAAGCCATGCTCAGAAATATTTCAACAGGCAAAGCAACGTGTCGAGGAGGAAAAGACGCTCAAGTTTGTTCGACATTGTTGCTGATGAAAGTGCTGATACACCAATGGAAGAACAGGACCTCTTGCCAGTTAGTCAGCCAGAGGCTAAAACAGAAGGCAATGACCCCTTGCCAGCTCCCCCAGCCATTGATGAAGAGTGTGAATCCATGGATTCCGCTTATTCGAACGATGGAGACTCTGCCTCAGTCTCTTTACAGCCAGATAGCTCACAGCCACAGTCACAGTTCCCAGTGCTATTTCCTGCTTACTTTTCTCCTTTCTTACCAGTTCCTCTGCCTTTTTGGTCTGGATACAGTTCAGAGCCCTCCAAGAAGGAGACAGTACATGAAGTGCTGAAGCCTACTGCAGTACATTCTAAAAGCCCCATCAATGTTGACGAACTGGTTGGCATGTCAAAACTCAGTTTAGGGGACTCTATTGCTGACTCTGGCCCTTCCTCTCTTTCGCTAAAACTCCTCGAGGGACCCTCTCGGCAGTCAGCTTTTCATGCAACTCCCTCATATGGTAATTCAGACATGAATGGCAATGCAATCCCTGCACTTTAA 1014 0.4872 MTRRCSHCSHNGHNSRTCPNRGVKLFGVRLTDGSIRKSASMSSLSHYAGSSSGAHHAVSVNSGSPGETPDHGAAADGYASEDFVPGSSSVSRERKKGVPWTEEEHRLFLLGLQKLGKGDWRGIARNYVISRTPTQVASHAQKYFNRQSNVSRRKRRSSLFDIVADESADTPMEEQDLLPVSQPEAKTEGNDPLPAPPAIDEECESMDSAYSNDGDSASVSLQPDSSQPQSQFPVLFPAYFSPFLPVPLPFWSGYSSEPSKKETVHEVLKPTAVHSKSPINVDELVGMSKLSLGDSIADSGPSSLSLKLLEGPSRQSAFHATPSYGNSDMNGNAIPAL 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g00620 337 MobiDBLite consensus disorder prediction 209 227 - -
Accr9g00620 337 MobiDBLite consensus disorder prediction 317 337 - -
Accr9g00620 337 MobiDBLite consensus disorder prediction 45 66 - -
Accr9g00620 337 MobiDBLite consensus disorder prediction 45 98 - -
Accr9g00620 337 NCBIfam myb-like DNA-binding domain, SHAQKYF class 95 147 IPR006447 GO:0003677
Accr9g00620 337 SMART sant 96 146 IPR001005 -
Accr9g00620 337 FunFam transcription factor MYB1R1 98 149 - -
Accr9g00620 337 PANTHER TRANSCRIPTION FACTOR KUA1 3 275 - -
Accr9g00620 337 MobiDBLite consensus disorder prediction 1 21 - -
Accr9g00620 337 SUPERFAMILY Homeodomain-like 94 149 IPR009057 -
Accr9g00620 337 CDD SANT 99 144 IPR001005 -
Accr9g00620 337 Gene3D - 98 150 - -
Accr9g00620 337 MobiDBLite consensus disorder prediction 164 227 - -
Accr9g00620 337 ProSiteProfiles SANT domain profile. 100 148 IPR017884 -
Accr9g00620 337 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 92 148 IPR017930 -
Accr9g00620 337 ProSiteProfiles Myb-like domain profile. 92 144 IPR001005 -
Accr9g00620 337 Pfam Myb-like DNA-binding domain 99 144 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr9g00620 Accr-Chr9 7218822 7221232 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Accr9g00620 Myb_DNA-binding 3.3e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr9g00620 - - pcin:129311785 527.324