Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g00611 ATGAGTCCACGTGCGTACACGAGAATGGGAAGGAATCCAGACGCATCAGAGGAGCTGTTCAAATACGGCGTCGTAGAGGTGGAGTACAGGAGGATTCCCTGCAGGTATGGGGCATACAACGTAGTGTTCAAAGGAAAGGAGCACAGCTCATACCCTAACTACATCGCCATTCTGGTGCTGTACGTGGAGGGCCAAAACGACATCACAGCCGTTGAGGTGTTTCAGGAGGATTACAAGCAGTGGAGGCCGTTGAGGAGGGCGTACGGAGTGGTGTTTGATGCCGAGAACCCACCACGTGGCGACTTGATGTTGAGGTTCCAGGTGAGTGGACGTGGGGGTGTGTATTGGGTTCAGGCCAAGAATGCTATTCCCAGGGACTGGAAGGCTGGACAAGCTTATGACTCTCAAGTTCAGCTAGATTAG 423 0.5296 MSPRAYTRMGRNPDASEELFKYGVVEVEYRRIPCRYGAYNVVFKGKEHSSYPNYIAILVLYVEGQNDITAVEVFQEDYKQWRPLRRAYGVVFDAENPPRGDLMLRFQVSGRGGVYWVQAKNAIPRDWKAGQAYDSQVQLD 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g00611 140 PRINTS Expansin/Lol pI family signature 81 95 IPR007118 GO:0005576
Accr9g00611 140 PRINTS Expansin/Lol pI family signature 22 38 IPR007118 GO:0005576
Accr9g00611 140 PRINTS Expansin/Lol pI family signature 121 135 IPR007118 GO:0005576
Accr9g00611 140 Pfam Expansin C-terminal domain 43 124 IPR007117 -
Accr9g00611 140 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 53 135 IPR007117 -
Accr9g00611 140 Gene3D - 37 139 IPR036749 -
Accr9g00611 140 PANTHER EXPANSIN-B3 1 138 - -
Accr9g00611 140 SUPERFAMILY PHL pollen allergen 48 135 IPR036749 -
Accr9g00611 140 PRINTS Major pollen allergen Lol pI signature 111 128 IPR005795 GO:0005576|GO:0019953
Accr9g00611 140 PRINTS Major pollen allergen Lol pI signature 60 75 IPR005795 GO:0005576|GO:0019953
Accr9g00611 140 PRINTS Major pollen allergen Lol pI signature 44 59 IPR005795 GO:0005576|GO:0019953
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr9g00611 Accr-Chr9 7044439 7044861 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr9g00611 1 139 Expansin Gene Family AT4G17030 58.273 1.82e-55 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr9g00611 - - qsa:O6P43_024411 207.994